Department of Biology

 

 
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  1. 2020
  2. Published

    The evolutionary history of extinct and living lions

    de Manuel, M., Barnett, R., Sandoval-Velasco, M., Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M-H. S., Mak, S. S. T., Caroe, C., Liu, S., Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K-P., Johnson, W. E., Antunes, A. & 9 others, Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Electronic monitoring in fisheries: lessons from global experiences and future opportunities

    van Helmond, A. T. M., Mortensen, L. O., Plet-Hansen, K. S., Ulrich, C., Needle, C. L., Oesterwind, D., Kindt-Larsen, L., Catchpole, T., Mangi, S., Zimmermann, C., Olesen, H. J., Bailey, N., Bergsson, H., Dalskov, J., Elson, J., Hosken, M., Peterson, L., McElderry, H., Ruiz, J., Pierre, J. P. & 2 others, Dykstra, C. & Poos, J. J., 2020, In: Fish and Fisheries. 21, 1, p. 162-189

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Nitrogen Fixation in a Changing Arctic Ocean: An Overlooked Source of Nitrogen?

    Winberg von Friesen, Lisa & Riemann, Lasse, 2020, In: Frontiers in Microbiology. 11, 9 p., 596426.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Ecophysiology with barley eceriferum (cer) mutants: the effects of humidity and wax crystal structure on yield and vegetative parameters

    von Wettstein, Penny, 2020, In: Annals of Botany. 126, 2, p. 301-313 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. 2021
  7. Published

    Commercially available kelp and seaweed products – valuable iodine source or risk of excess intake?

    Aakre, I., Solli, D. D., Markhus, M. W., Mæhre, H. K., Dahl, L., Henjum, S., Alexander, J., Korneliussen, P., Madsen, L. & Kjellevold, M., 2021, In: Food & Nutrition Research. 65, 17 p., 7584.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Molekylære stavefejl

    Abildgaard, A. B., Winther, Jakob R., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 28 Jan 2021, In: Weekendavisen, Ideer.

    Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

  9. Published

    VM i molekylære puslespil

    Abildgaard, A. B., Winther, Jakob R., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 16 Apr 2021, In: Weekendavisen: Ideer. 15, p. 11

    Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

  10. Published

    Charge Engineering Reveals the Roles of Ionizable Side Chains in Electrospray Ionization Mass Spectrometry

    Abramsson, M. L., Sahin, C., Hopper, J. T. S., Branca, R. M. M., Danielsson, J., Xu, M., Chandler, S. A., Österlund, N., Ilag, L. L., Leppert, A., Costeira-Paulo, J., Lang, L., Teilum, K., Laganowsky, A., Benesch, J. L. P., Oliveberg, M., Robinson, C. V., Marklund, E. G., Allison, T. M., Winther, J. R. & 1 others, Landreh, M., 2021, In: JACS Au. 1, 12, p. 2385-2393 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Hairs distinguish castes and sexes: identifying the early ontogenetic building blocks of a fungus-farming superorganism (Hymenoptera: Formicidae)

    Adams, R. M. M., Larsen, Rasmus Stenbak, Stylianidi, N., Cheung, D., Qiu, Bitao, Murray, S. K., KU, thw266 & Boomsma, Jacobus J., 2021, In: Myrmecological News. 31, p. 201-216 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    COVID-19 drug practices risk antimicrobial resistance evolution

    MetaSUB Consortium, M. C., 2021, In: The Lancet Microbe. 2, 4, p. e135-e136

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  13. Published

    Circulating Free Fatty Acid and Phospholipid Signature Predicts Early Rapid Kidney Function Decline in Patients With Type 1 Diabetes

    Afshinnia, F., Rajendiran, T. M., He, C., Byun, J., Montemayor, D., Darshi, M., Tumova, J., Kim, J., Limonte, C. P., Miller, R. G., Costacou, T., Orchard, T. J., Ahluwalia, Tarun Veer Singh, Rossing, Peter, Snell-Bergeon, J. K., de Boer, I. H., Natarajan, L., Michailidis, G., Sharma, K. & Pennathur, S., 2021, In: Diabetes Care. 44, 9, p. 2098-2106 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Potent Inhibitor of Human Trypsins from the Aeruginosin Family of Natural Products

    Ahmed, M. N., Wahlsten, M., Jokela, J., Nees, M., Stenman, U., Alvarenga, Danillo Oliveira, Strandin, T., Sivonen, K., Poso, A., Permi, P., Metsä-Ketelä, M., Koistinen, H. & Fewer, D. P., 2021, In: ACS chemical biology. 16, 11, p. 2537–2546 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Refinement of α-Synuclein Ensembles Against SAXS Data: Comparison of Force Fields and Methods

    Ahmed, M. C., Skaanning, L. K., Jussupow, A., Newcombe, Estella Anne, Kragelund, Birthe Brandt, Camilloni, C., Langkilde, Annette Eva & Lindorff-Larsen, Kresten, 2021, In: Frontiers in Molecular Biosciences. 8, 13 p., 654333.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Macroecology of macrophytes in the freshwater realm: Patterns, mechanisms and implications

    Alahuhta, J., Lindholm, M., Båstrup-Spohr, Lars, García-Girón, J., Toivanen, M., Heino, J. & Murphy, K., 2021, In: Aquatic Botany. 168, 10 p., 103325.

    Research output: Contribution to journal › Review › Research › peer-review

  17. Published

    An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms

    Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Calmodulin downregulation in conditional knockout HeLa cells inhibits cell migration

    Alcalde, J., Munk, M., González-Muñoz, M., Panina, S., Berchtold, Martin Werner & Villalobo, A., 2021, In: Archives of Biochemistry and Biophysics. 697, 9 p., 108680.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Immune challenges increase network centrality in a queenless ant

    Alciatore, G., Ugelvig, Line Vej, Frank, E., Bidaux, J., Gal, A., Schmitt, T., Kronauer, D. J. C. & Ulrich, Y., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1958, 9 p., 20211456.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Divergent expression of hypoxia response systems under deoxygenation in reef-forming corals aligns with bleaching susceptibility

    Alderdice, R., Suggett, D. J., Cárdenas, A., Hughes, D. J., Kühl, Michael, Pernice, M. & Voolstra, C. R., 2021, In: Global Change Biology. 27, 2, p. 312-326 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Genome editing in archaeal viruses and endogenous viral protein purification

    Alfastsen, L., Peng, Xu & Bhoobalan, Yuvaraj, 2021, In: STAR Protocols. 2, 4, 27 p., 100791.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Muscular adaptations in swimming scale worms (Polynoidae, Annelida)

    Allentoft-Larsen, M. C., Gonzalez, B. C., Daniels, J., Katija, K., Osborn, K. & Worsaae, Katrine, 2021, In: Royal Society Open Science. 8, 10, 22 p., 210541.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum: [incl. correction]

    Altenburger, A., Cai, H., Li, Q., Drumm, Kirstine, Kim, M., Zhu, Y., Garcia-Cuetos, L., Zhan, X., Hansen, Per Juel, John, U., Li, S. & Lundholm, Nina, 2021, In: The ISME Journal. 15, 4, p. 1056-1072 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Indirect effects of climate change inhibit N2 fixation associated with the feathermoss Hylocomium splendens in subarctic tundra

    Alvarenga, Danillo Oliveira & Rousk, Kathrin, 2021, In: Science of the Total Environment. 795, 7 p., 148676.

    Research output: Contribution to journal › Letter › Research › peer-review

  25. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    High-throughput screening alternative to crystal violet biofilm assay combining fluorescence quantification and imaging

    Amador Hierro, Cristina Isabel, Stannius, R. O., Røder, Henriette Lyng & Burmølle, Mette, 2021, In: Journal of Microbiological Methods. 190, 5 p., 106343.

    Research output: Contribution to journal › Letter › Research › peer-review

  27. Published

    A complex of BRCA2 and PP2A-B56 is required for DNA repair by homologous recombination

    Ambjørn, Sara Marie, Duxin, Julien, Hertz, Emil Peter Thrane, Nasa, I., Duro, Joana Maria, Kruse, Thomas, Lopez-Mendez, B., Rymarczyk, B., Cressey, L. E., van Overeem Hansen, T., Kettenbach, A. N., Østergaard, Vibe Hallundbæk, Lisby, Michael & Nilsson, Jakob, 2021, In: Nature Communications. 12, 1, 11 p., 5748.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Systems-wide effects of short-term feed deprivation in obese mice

    Andersen, D., Roager, Henrik Munch, Zhang, L., Moll, J. M., Frandsen, H. L., Danneskiold-Samsøe, Niels Banhos, Hansen, Axel Kornerup, Kristiansen, Karsten, Licht, T. R. & Brix, Susanne, 2021, In: Scientific Reports. 11, 11 p., 5716.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Metabolic reprogramming by driver mutation-tumor microenvironment interplay in pancreatic cancer: new therapeutic targets

    Andersen, Henriette Berg, Ialchina, Renata, Pedersen, Stine Helene Falsig & Czaplinska, D., 2021, In: Cancer and Metastasis Reviews. 40, 4, p. 1093-1114 22 p.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Functional Feeding Groups of Macrofauna and Detritus Decomposition along a Gradient of Glacial Meltwater Influence in Tropical High-Andean Streams

    Andino, P., Espinosa, R., Crespo-Pérez, V., Cauvy-Fraunié, S., Dangles, O. & Jacobsen, Dean, 2021, In: Water. 13, 22, 16 p., 3303.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

    Andrade, P., Gazda, M. A., Araújo, P. M., Afonso, S., Rasmussen, Jacob Agerbo, Marques, C. I., Lopes, R. J., Gilbert, M Thomas P & Carneiro, M., 2021, In: PLOS Genetics. 17, 2, 16 p., 1009404.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles

    Andreu-Sánchez, S., Chen, W., Stiller, Josefin & KU, thw266, 2021, In: GigaScience. 10, 1, 11 p., giaa161.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Polyketide synthase genes and molecular trade-offs in the ichthyotoxic species Prymnesium parvum

    Anestis, K., Kohli, G. S., Wohlrab, S., Varga, E., Larsen, T. O., Hansen, Per Juel & John, U., 2021, In: Science of the Total Environment. 795, 10 p., 148878.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Substitutional landscape of a split fluorescent protein fragment using high-density peptide microarrays

    Antonescu, O. N., Rasmussen, A., Damm, N. A. M., Heidemann, Ditte Fogh, Popov, R., Nesterov-Mueller, A., Johansson, Kristoffer Enøe & Winther, Jakob R., 2021, In: PLoS ONE. 16, 2, 17 p., e0241461.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Diversity and Evolution of Entomocorticium (Russulales, Peniophoraceae), a Genus of Bark Beetle Mutualists Derived from Free-Living, Wood Rotting Peniophora

    Araújo, J. P. M., Li, Y., Six, D., Rajchenberg, M., Smith, M. E., Johnson, A. J., Klepzig, K. D., Crous, P. W., A. Leal-Dutra, Caio, Skelton, J., Adams, S. N. & Hulcr, J., 2021, In: Journal of Fungi. 7, 12, 26 p., 1043.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Metabolomics unveils the influence of dietary phytochemicals on residual pesticide concentrations in honey bees

    Ardalani, H., Vidkjær, Nanna Hjort, Kryger, P., Fiehn, O. & Fomsgaard, I. S., 2021, In: Environment International. 152, 10 p., 106503.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity

    Arora, P., Andersen, D., Moll, J. M., Danneskiold-Samsøe, Niels Banhos, Xu, L., Zhou, B., Kladis, G., Rausch, P., Workman, C. T., Kristiansen, Karsten & Brix, S., 2021, In: Frontiers in Immunology. 12, 13 p., 629391.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Isolation, characterization, and genome assembly of Barnettozyma botsteinii sp. nov. and novel strains of Kurtzmaniella quercitrusa isolated from the intestinal tract of the termite Macrotermes bellicosus

    Arrey Tané, Gerard, Li, G., Murphy, Rob, Guimaraes, L., Alizadeh, S., Poulsen, Michael & Regenberg, Birgitte, 2021, In: G3: Genes, Genomes, Genetics. 11, 12, 13 p., jkab342.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2

    Arribas Hernandez, Laura, Rennie, Sarah, Köster, T., Porcelli, C., Lewinski, M., Staiger, D., Andersson, Robin & Brodersen, Peter, 2021, In: eLife. 10, 33 p., e72375.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation

    Arribas Hernandez, Laura, Rennie, Sarah, Schon, M., Porcelli, C., Enugutti, B., Andersson, Robin, Nodine, M. D. & Brodersen, Peter, 2021, In: eLife. 10, 27 p., e72377.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Juvenile hormone pathway in honey bee larvae: A source of possible signal molecules for the reproductive behavior of Varroa destructor

    Aurori, C. M., Giurgiu, A. I., Conlon, B. H., Kastally, C., Dezmirean, D. S., Routtu, J. & Aurori, A., 2021, In: Ecology and Evolution. 11, 2, p. 1057-1068 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Topoisomerase II deficiency leads to a postreplicative structural shift in all Saccharomyces cerevisiae chromosomes

    Ayra-Plasencia, J., Ramos-Pérez, C., Santana-Sosa, S., Quevedo, O., Medina-Suárez, S., Matos-Perdomo, E., Zamora-Dorta, M., Brown, G. W., Lisby, Michael & Machín, F., 2021, In: Scientific Reports. 11, 16 p., 14940.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Mercury bioaccumulation pathways in tusk (Brosme brosme) from Sognefjord, Norway: Insights from C and N isotopes

    Azad, A. M., Frantzen, S., Bank, M. S., Madsen, L. & Maage, A., 2021, In: Environmental Pollution. 269, 10 p., 115997.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Distinct rhizomicrobiota assemblages and plant performance in lettuce grown in soils with different agricultural management histories

    Babin, D., Sommermann, L., Chowdhury, S. P., Behr, J. H., Sandmann, M., Neumann, G., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2021, In: FEMS Microbiology Ecology. 97, 4, 21 p., fiab027.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Functions of TopBP1 in preserving genome integrity during mitosis

    Bagge, J., Østergaard, Vibe Hallundbæk & Lisby, Michael, 2021, In: Seminars in Cell and Developmental Biology. 113, p. 57-64 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  46. Published

    Phenological stage of tundra vegetation controls bidirectional exchange of BVOCs in a climate change experiment on a subarctic heath

    Baggesen, N., Li, Tao, Seco, Roger, Holst, T., Michelsen, Anders & Rinnan, Riikka, 2021, In: Global Change Biology. 27, 12, p. 2928-2944 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Bidirectional exchange of biogenic volatile organic compounds between subarctic heath tundra and the atmosphere

    Baggesen, N. S., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 202 p.

    Research output: Book/Report › Ph.D. thesis › Research

  48. Published

    Detecting bird’s eggs in the diet of raccoon dog (Nyctereutes procyonoides)

    Bahlke, S. Ø., Nash, David Richard, Pedersen, Jes Søe, Hansen, Mette Sif, Chriél, M. & Pagh, S., 2021, In: Genetics and Biodiversity Journal. 5, 2, p. 127-139 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Bending during seedling emergence: Mechanochemical insight

    Bai, B., 2021, In: Trends in Plant Science. 26, 9, p. 879-881 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  50. Published

    Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis

    Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, Joseph, Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Monsters in the dark: systematics and biogeography of the stygobitic genus Godzillius (Crustacea: Remipedia) from the Lucayan Archipelago

    Ballou, L., Iliffe, T. M., Kakuk, B., Gonzalez, B. C., Osborn, K. J., Worsaae, Katrine, Meland, K., Broad, K., Bracken-Grissom, H. & Olesen, Jørgen, 2021, In: European Journal of Taxonomy. 751, p. 115-139 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil

    Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.

    Research output: Contribution to journal › Journal article › Research › peer-review

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