Publications from

Total publications from unit:

2023

1.

 René L. Bærentsen, Stine V. Nielsen, Ragnhild B. Skjerning, Jeppe Lyngsø, Francesco Bisiak, Jan Skov Pedersen, Kenn Gerdes, Michael A. Sørensen and Ditlev E. Brodersen. (2023) Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system eLife 12.

2022

2.

 Yusuke Himeoka, Bertil Gummesson, Michael A Sørensen, Sine Lo Svenningsen and Namiko Mitarai. (2022) Distinct Survival, Growth Lag, and rRNA Degradation Kinetics during Long-Term Starvation for Carbon or Phosphate mSphere 7(3).

3.

 Mikkel Skjoldan Svenningsen, Sine Lo Svenningsen, Michael Askvad Sørensen and Namiko Mitarai. (2022) Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse Life Science Alliance 5(2).

4.

 Rocio Espinosa, Michael Askvad Sørensen and Sine Lo Svenningsen. (2022) Escherichia coli protein synthesis is limited by mRNA availability rather than ribosomal capacity during phosphate starvation Frontiers in Microbiology 13.

2021

5.

 Kristoffer Skovbo Winther, Michael Askvad Sørensen and Sine Lo Svenningsen. (2021) Polyamines are Required for tRNA Anticodon Modification in Escherichia coli Journal of Molecular Biology 433(15).

6.

 Thomas Søndergaard Stenum, Mette Kongstad, Erik Holmqvist, Birgitte Kallipolitis, Sine Lo Svenningsen and Michael Askvad Sørensen. (2021) Three Ribosomal Operons of Escherichia coli Contain Genes Encoding Small RNAs That Interact With Hfq and CsrA in vitro Frontiers in Microbiology 12.

7.

 Thomas Prossliner, Kenn Gerdes, Michael Askvad Sørensen and Kristoffer Skovbo Winther. (2021) Hibernation factors directly block ribonucleases from entering the ribosome in response to starvation: [+ erratum] Nucleic Acids Research 49(4):2226-2239.

2020

8.

 Bertil Gummesson, Shiraz Ali Shah, Alexander Skov Borum, Mathias Fessler, Namiko Mitarai, Michael Askvad Sørensen and Sine Lo Svenningsen. (2020) Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing Frontiers in Genetics 11.

9.

 Mathias Fessler, Bertil Gummesson, Godefroid Charbon, Sine Lo Svenningsen and Michael Askvad Sørensen. (2020) Short-term kinetics of rRNA degradation in Escherichia coli upon starvation for carbon, amino acid, or phosphate Molecular Microbiology 113(5):951-963.

2018

10.

 Michael Askvad Sørensen, Annaleigh Ohrt Fehler and Sine Lo Svenningsen. (2018) Transfer RNA instability as a stress response in Escherichia coli: rapid dynamics of the tRNA pool as a function of demand RNA Biology 15:586-593.

11.

 Thomas Prossliner, Kristoffer Skovbo Winther, Michael Askvad Sørensen and Kenn Gerdes. (2018) Ribosome Hibernation Annual Review of Genetics 52:321-348.

2017

12.

 Thomas Søndergaard Stenum, Michael Askvad Sørensen and Sine Lo Svenningsen. (2017) Quantification of the abundance and charging levels of transfer RNAs in Escherichia coli Journal of Visualized Experiments 126.

13.

 Alexander Harms, Cinzia Fino, Michael Askvad Sørensen, Szabolcs Semsey and Kenn Gerdes. (2017) Prophages and growth dynamics confound experimental results with antibiotic-tolerant persister cells mBio 8(6).

14.

 Sine Lo Svenningsen, Mette Kongstad, Thomas Søndergaard Stenum, Ana Josefa Muñoz Gomez and Michael Askvad Sørensen. (2017) Transfer RNA is highly unstable during early amino acid starvation in Escherichia coli Nucleic Acids Research 45(2):793-804.

2016

15.

 Chengzhe Tian, Mohammad Roghanian, Mikkel Girke Jørgensen, Kim Sneppen, Michael Askvad Sørensen, Kenn Gerdes and Namiko Mitarai. (2016) Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases Journal of Bacteriology 198(14):1918-1926.

2014

16.

 Rebecca Bolt Ettlinger, Michael Askvad Sørensen and Lene Broeng Oddershede. (2014) Force spectroscopy of DNA and RNA: structure and kinetics from single-molecule experiments Nucleic Acid Nanotechnology 29:23-52.

2013

17.

 Mette Eriksen, Peter Horvath, Michael Askvad Sørensen, Szabolcs Semsey, Lene Broeng Oddershede and Liselotte Jauffred Pedersen. (2013) A novel complex: a quantum dot conjugated to an active T7 RNA Polymerase Journal of Nanomaterials 2013.

2012

18.

 Jesper Tholstrup Hansen, Lene Broeng Oddershede and Michael Askvad Sørensen. (2012) mRNA pseudoknot structures can act as ribosomal roadblocks Nucleic Acids Research 40(1):303-313.

2007

19.

 Morten Ejby, Michael A Sørensen and Steen Pedersen. (2007) Pseudouridylation of helix 69 of 23S rRNA is necessary for an effective translation termination. Proceedings of the National Academy of Science of the United States of America 104(49):19410-5.

20.

 Thomas Møller Hansen, S Nader S Reihani, Lene B Oddershede and Michael A Sørensen. (2007) Correlation between mechanical strength of messenger RNA pseudoknots and ribosomal frameshifting. Proceedings of the National Academy of Science of the United States of America 104(14):5830-5.

2005

21.

 K. A. Dittmar, Michael Askvad Sørensen, J. Elf, M. Ehrenberg and Tao Pan. (2005) Selective charging of tRNA isoacceptors induced by amino-acid starvation EMBO Reports 6(2):151–157.

22.

 Michael Askvad Sørensen, J. Elf, E. Bouakaz, T. Tenson, S. Sanyal, G. R. Björk and M. Ehrenberg. (2005) Over Expression of a tRNALeu Isoacceptor Changes Charging Pattern of Leucine tRNAs and Reveals New Codon Reading Journal of Molecular Biology 354(1):16-24.

2001

23.

 M.A. Sørensen. (2001) Charging Levels of Four tRNA Species in Escherichia coli Rel+ and REL- Strains during Amino Acid Starvation: A Simple Model for the Effect of ppGpp on Translational Accuracy Journal of Molecular Biology 307(3):785-798.

1998

24.

 Malene K. Krüger, Steen Pedersen, Tord G. Hagervall and Michael A. Sørensen. (1998) The modification of the wobble base of tRNA(Glu) modulates the translation rate of glutamic acid codons in vivo Journal of Molecular Biology 284(3):621-631.

25.

 M.A. Sørensen, J. Fricke and Steen Pedersen. (1998) Ribosomal Protein S1 required for translation of most, if not all, natural mRNAs in Escherichia coli in vivo Journal of Molecular Biology(280):561-569.

26.

 Malene Kappen Krüger and M.A. Sørensen. (1998) Aminoacylation of hypomodified tRNAGlu in vivo Journal of Molecular Biology 284(3):609-620.

27.

 Malene Kappen Krüger, Steen Pedersen, T.G. Hagervall and M.A. Sørensen. (1998) The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codons in vivo J. Mol. Biol.(284):609-620.

1994

28.

 M.A. Sørensen, K.F. Jensen and Steen Pedersen. (1994) High Concentrations of ppGpp Decrease the RNA Chain Growth Rate. Implications for Protein Synthesis and Translation Fidelity During Amino Acid Starvation in Escherichia coli Journal of Molecular Biology:441-454.

1993

29.

 J. Vind, M.A. Sørensen, M.D. Rasmussen and Steen Pedersen. (1993) Synthesis of proteins in Escherichia coli is limited by the concentration of free ribosomes Journal of Molecular Biology:678-688.

30.

 M.D. Rasmussen, M.A. Sørensen and Steen Pedersen. (1993) Isolation and characterization of mutants with impaired regulation of rpsA, the gene encoding ribosomal protein S1 of Escherichia coli Molecular Genetics and Genomics 240:23-28.

1992

31.

 U. Vogel, M.A. Sørensen, Steen Pedersen, Kaj Frank Jensen and M. Kilstrup. (1992) Decreasing transcription elongation rate in Escherichia coli exposed to amino acid starvation Molecular Microbiology 6(15):2191-2200.

1991

32.

 M.A. Sørensen and Steen Pedersen. (1991) Absolute in vivo translation rates of individual codons in Escherichia coli: The two glutamic acid codons GAA and GAG are translated with a threefold difference in rate Journal of Molecular Biology 222(2):265-280.

33.

 M.A. Sørensen and Steen Pedersen. (1991) Cysteine, Even in Low Concentrations, Induces Transient Amino Acid Starvation in Escherichia coli J. Bacteriol.:5244-46.

1989

34.

 Michael Askvad Sørensen, C G Kurland and Steen Pedersen. (1989) Codon usage determines translation rate in Escherichia coli Journal of Molecular Biology 207(2):365-77.

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