- 2016
- Published
Configuration-dependent Presentation of Multivalent IL-15: IL-15Rα enhances the antigen-specific T cell response and anti-tumor immunity
Hong, E., Usiskin, I. M., Bergamaschi, C., Hanlon, D. J., Edelson, R. L., Justesen, S., Pavlakis, G. N., Flavell, R. A. & Fahmy, T. M., 22 Apr 2016, In: Journal of Biological Chemistry. 291, 17, p. 8931-8950 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mining Hot Springs for Biodiversity and Novel Enzymes
Islin, S. R., 2016, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs
Islin, S. R., Menzel, P., Krogh, Anders, Young, M. & Peng, Xu, 2016, In: Environmental Microbiology. 18, 3, p. 863-874 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural analysis of sumoylated proteins in Schizosaccharomyces pombe : with a special focus on the DNA binding protein Sap1
Jørgensen, M. L. M., 2016, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Guidelines for the use and interpretation of assays for monitoring autophagy: 3rd edition
Klionsky, D. J., Abdelmohsen, K., Abe, A., Abedin, M. J., Abeliovich, H., Acevedo Arozena, A., Adachi, H., Adams, C. M., Adams, P. D., Adeli, K., Adhihetty, P. J., Adler, S. G., Agam, G., Agarwal, R., Aghi, M. K., Agnello, M., Agostinis, P., Aguilar, P. V., Aguirre-Ghiso, J., Airoldi, E. M. & 2,447 others, , 2016, In: Autophagy. 12, 1, p. 1-222 222 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Pro-recombination role of Srs2 protein requires SUMO (small ubiquitin-like modifier) but is independent of PCNA (proliferating cell nuclear antigen) interaction
Kolesar, P., Altmannova, V., Pinela da Silva, S. C., Lisby, Michael & Krejci, L., 2016, In: Journal of Biological Chemistry. 291, 14, p. 7594-7607 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uropathogenic Escherichia coli metabolite-dependent quiescence and persistence may explain antibiotic tolerance during urinary tract infection
Leatham-Jensen, M. P., Mokszycki, M. E., Rowley, D. C., Deering, R., Camberg, J. L., Sokurenko, E. V., Tchesnokova, V. L., Frimodt-Møller, Jakob, Krogfelt, K. A., Nielsen, K. L., Frimodt-Møller, N., Sun, G. & Cohen, P. S., 2016, In: mSphere. 1, 1, 22 p., e00055-15.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptome changes in STSV2-infected Sulfolobus islandicus REY15A undergoing continuous CRISPR spacer acquisition
León Sobrino, C., Kot, W. P. & Garrett, Roger Antony, 2016, In: Molecular Microbiology. 99, 4, p. 719-728 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
MYB75 phosphorylation by MPK4 is required for light-induced anthocyanin accumulation in arabidopsis
Li, S., Wang, W., Gao, J., Yin, K., Wang, R., Wang, C., Petersen, Morten, Mundy, J. & Qiu, J., 2016, In: The Plant Cell. 28, 11, p. 2866-2883 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adipokinetic hormones and their G protein-coupled receptors emerged in Lophotrochozoa
Li, S., Hauser, Frank, Skadborg, S. K., Nielsen, S. V., Kirketerp-Møller, N. & Grimmelikhuijzen, Cornelis (Cok), 2016, In: Scientific Reports. 6, 13 p., 32789.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Harnessing type I and type III CRISPR-Cas systems for genome editing
Li, Y., Pan, S., Zhang, Y., Ren, M., Feng, M., Peng, N., Chen, L., Liang, Y. X. & She, Q., 2016, In: Nucleic Acids Research. 44, 4, 12 p., e34.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Construction and characterization of three protein-targeting expression system in Lactobacillus casei
Lin, J., Zou, Y., Ma, C., Liang, Y., Ge, X., Chen, Z. & She, Q., 2016, In: F E M S Microbiology Letters. 363, 7, 8 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Diverse gene functions in a soil mobilome
Luo, W., Xu, Z., Riber, Leise, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Soil Biology & Biochemistry. 101, p. 175-183 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cdc14 phosphatase: warning, no delay allowed for chromosome segregation!
Machín, F., Quevedo Rodriguez, O., Ramos-Pérez, C. & García-Luis, J., 2016, In: Current Genetics. 62, 1, p. 7-13 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple consecutive initiation of replication producing novel brush-like intermediates at the termini of linear viral dsDNA genomes with hairpin ends.
Martinez Alvarez, Laura, Bell, S. D. & Peng, Xu, 2016, In: Nucleic Acids Research. 44, 18, p. 8799-8809 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Secretion of alpha-hemolysin by Escherichia coil disrupts tight junctions in ulcerative colitis patients
Mirsepasi-Lauridsen, H. C., Du, Z., Struve, C., Charbon, Godefroid, Karczewski, J., Krogfelt, K. A., Petersen, A. M. & Wells, J. M., 2016, In: Clinical and Translational Gastroenterology. 7, 9 p., e149.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of HERC2 and RNF8 ubiquitin E3 ligases in the promotion of translesion DNA synthesis in the chicken DT40 cell line
Mohiuddin, M., Kobayashi, S., Keka, I. S., Guilbaud, G., Sale, J., Narita, Takeo, Abdel-Aziz, H. I., Wang, X., Ogawa, S., Sasanuma, H., Chiu, R., Østergaard, Vibe Hallundbæk, Lisby, Michael & Takeda, S., Apr 2016, In: DNA Repair. 40, p. 67-76 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TOPBP1 regulates RAD51 phosphorylation and chromatin loading and determines PARP inhibitor sensitivity
Moudry, P., Watanabe, K., Wolanin, K. M., Bartkova, J., Wassing, I. E., Watanabe, S., Strauss, R., Pedersen, R. T., Østergaard, Vibe Hallundbæk, Lisby, Michael, Andújar-Sánchez, M., Maya-Mendoza, A., Esashi, F., Lukas, Jiri & Bartek, J., 2016, In: The Journal of Cell Biology. 212, 3, p. 281-288 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Major and minor crRNA annealing sites facilitate low stringency DNA protospacer binding prior to Type I-A CRISPR-Cas interference in Sulfolobus
Mousaei, M., Deng, Ling, She, Q. & Garrett, Roger Antony, 2016, In: R N A Biology. 13, 11, p. 1166-1173 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronization of S phase in Schizosaccharomyces pombe cells by transient exposure to M-factor pheromone
Nielsen, Olaf, 2016, In: Cold Spring Harbor Protocols. 2016, 9, p. 768-772 5 p.Research output: Contribution to journal › Journal article › Research
- Published
Nucleation and spreading of a heterochromatic domain in fission yeast
Obersriebnig, M. J., Pallesen, E. M. H., Sneppen, Kim, Trusina, Ala & Thon, Genevieve, 2016, In: Nature Communications. 7, 11 p., 11518.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An amphipathic undecapeptide with all D-amino acids shows promising activity against colistin-resistant strains of Acinetobacter baumannii and a dual mode of action
Oddo, A., Thomsen, T. T., Kjelstrup, S., Gorey, C., Franzyk, Henrik, Frimodt-Møller, N., Løbner-Olesen, Anders & Hansen, Paul Robert, 2016, In: Antimicrobial Agents and Chemotherapy. 60, 1, p. 592-599 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modulation of backbone flexibility for effective dissociation of antibacterial and hemolytic activity in cyclic peptides
Oddo, A., Thomsen, T. T., Britt, H. M., Løbner-Olesen, Anders, Thulstrup, Peter Waaben, Sanderson, J. M. & Hansen, Paul Robert, 2016, In: ACS Medicinal Chemistry Letters. 7, 8, p. 741-745 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulating retrotransposon activity through the use of alternative transcription start sites
Persson, J., Steglich, B., Smialowska, A., Boyd, M., Lange, Jette Bornholdt, Andersson, Robin, Schurra, C., Arcangioli, B., Sandelin, Albin Gustav, Nielsen, Olaf & Ekwall, K., 2016, In: E M B O Reports. 17, 5, p. 753-768 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mte1 interacts with Mph1 and promotes crossover recombination and telomere maintenance
Pinela da Silva, S. C., Altmannova, V., Luke-Glaser, S., Henriksen, P., Gallina, I., Yang, X., Choudhary, Chunaram, Luke, B., Krejci, L. & Lisby, Michael, 2016, In: Genes & Development. 30, 6, p. 700-717 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SUMOylation of Rad52-Rad59 synergistically change the outcome of mitotic recombination
Pinela da Silva, S. C., Altmannova, V., Eckert-Boulet, N. V., Kolesar, P., Gallina, I., Hang, L., Chun, I., Arneric, M., Zhao, X., Buron, L. D., Mortensen, U. H., Krejci, L. & Lisby, Michael, 2016, In: D N A Repair. 42, p. 11-25 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viruses of the Archaea
Prangishvili, D., Basta, T., Garrett, Roger Antony & Krupovic, M., 2016, In: eLS. 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Multiple DNA binding proteins contribute to timing of chromosome replication in E. coli
Riber, Leise, Frimodt-Møller, Jakob, Charbon, Godefroid & Løbner-Olesen, Anders, 2016, In: Frontiers in Molecular Biosciences. 3, 9 p., 29.Research output: Contribution to journal › Review › Research › peer-review
- Published
Making sense of plant autoimmunity and "negative regulators'
Rodriguez, Eleazar, Ghoul, H. E., Mundy, J. & Petersen, Morten, 2016, In: F E B S Journal. 283, 8, p. 1385-1391 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP
Sheppard, C., Blombach, F., Belsom, A., Schulz, S., Daviter, T., Smollett, K., Mahieu, E., Erdmann, S., Tinnefeld, P., Garrett, Roger Antony, Grohmann, D., Rappsilber, J. & Werner, F., 2016, In: Nature Communications. 7, 13 p., 13595.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Alarmone (p)ppGpp regulates the transition from pathogenicity to mutualism in Photorhabdus luminescens
Skjerning, R. B., Roghanian, Mohammad, Gerdes, K. & Clarke, D. J., 2016, In: Molecular Microbiology. 100, 4, p. 735-747 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability of Hyperthermophilic Proteins: Post-translational modification and other factors
Stiefler-Jensen, D., 2016, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Salmonella Typhimurium undergoes distinct genetic adaption during chronic infections of mice
Søndberg, E. & Jelsbak, L., 2016, In: BMC Microbiology. 16, 11 p., 30.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The lantibiotic NAI-107 efficiently rescues Drosophila melanogaster from infection with methicillin-resistant Staphylococcus aureus USA300
Thomsen, T. T., Mojsoska, B., Cruz, J. C. S., Donadio, S., Jenssen, H., Løbner-Olesen, Anders & Rewitz, Kim, 2016, In: Antimicrobial Agents and Chemotherapy. 60, 9, p. 5427-5436 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rapid Curtailing of the Stringent Response by Toxin-Antitoxin Encoded mRNases
Tian, C., Roghanian, Mohammad, Jørgensen, M. G., Sneppen, Kim, Sørensen, Michael Askvad, Gerdes, K. & Mitarai, Namiko, Jul 2016, In: Journal of Bacteriology. 198, 14, p. 1918-1926Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Life cycle characterization of Sulfolobus monocaudavirus 1, an extremophilic spindle-shaped virus with extracellular tail development
Uldahl, K. B., Jensen, S. B., Bhoobalan, Yuvaraj, Martinez Alvarez, Laura, Papathanasiou, P. & Peng, Xu, Jun 2016, In: Journal of Virology. 90, 12, p. 5693-5699 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Recognition of extremophilic archaeal viruses by eukaryotic cells: a promising nanoplatform from the third domain of life
Uldahl, K. B., Wu, L., Hall, A., Papathanasiou, P., Peng, Xu & Moghimi, S. M., 2016, In: Scientific Reports. 6, 37966.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
VapCs of Mycobacterium tuberculosis cleave RNAs essential for translation
Winther, K. S., Tree, J. J., Tollervey, D. & Gerdes, K., 2016, In: Nucleic Acids Research. 44, 20, p. 9860-9871 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery and characterization of a thermostable and highly halotolerant GH5 cellulase from an Icelandic hot spring isolate
Zarafeta, D., Kissas, D., Sayer, C., Islin, S. R., Ladoukakis, E., Isupov, M. N., Chatziioannou, A., Peng, Xu, Littlechild, J. A., Skretas, G. & Kolisis, F. N., 2016, In: P L o S One. 11, 1, 18 p., e0146454.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
EstDZ3: a new esterolytic enzyme exhibiting remarkable thermostability
Zarafeta, D., Szabo, Z., Moschidi, D., Phan, Safir Hien, Chrysina, E. D., Peng, Xu, Ingham, C. J., Kolisis, F. N. & Skretas, G., 2016, In: Frontiers in Microbiology. 7, 14 p., 1779.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The apt/6-methylpurine counterselection system and its applications in genetic studies of the hyperthermophilic archaeon Sulfolobus islandicus
Zhang, C., She, Q., Bi, H. & Whitaker, R. J., 2016, In: Applied and Environmental Microbiology. 82, 10, p. 3070-3081 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TopBP1 makes the final call for repair on the verge of cell division
Østergaard, Vibe Hallundbæk & Lisby, Michael, 2016, In: Molecular & Cellular Oncology. 3, 2, 3 p., e1093066.Research output: Contribution to journal › Review › Research › peer-review
- 2015
- Published
Suppressors of Hyperinitiation in Escherichia coli Couple DNA Replication to Precursor Biosynthesis and Energy Metabolism
Bjørn, L., 2015, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Dynamics and stabilization of the human gut microbiome during the first year of life
Bäckhed, G. F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., Khan, M. T., Zhang, J., Li, J., Xiao, L., Al-Aama, J., Zhang, D., Lee, Y. S., Kotowska, D. E., Colding, C. S., Tremaroli, V. & 7 others, , 2015, In: Cell Host & Microbe. 17, 5, p. 690-703 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic context drives transcription of insertion sequences in the bacterial endosymbiont Wolbachia wVulC
Cerveau, N., Gilbert, C., Liu, C., Garrett, Roger Antony, Greve, P., Bouchon, D. & Cordaux, R., 2015, In: Gene. 564, 1, p. 81-86 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Srs2 promotes Mus81-Mms4-mediated resolution of recombination intermediates
Chavdarova, M., Marini, V., Sisakova, A., Sedlackova, H., Vigasova, D., Brill, S. J., Lisby, Michael & Krejci, L., 2015, In: Nucleic Acids Research. 43, 7, p. 3626-3642 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Archaeal viruses of the sulfolobales: isolation, infection, and CRISPR spacer acquisition
Erdmann, S. & Garrett, Roger Antony, 2015, CRISPR: methods and protocols. Lundgren, M., Charpentier, E. & Fineran, P. C. (eds.). Springer, p. 223-232 10 p. (Methods in Molecular Biology, Vol. 1311).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries
Ferrandi, E. E., Sayer, C., Isupov, M. N., Annovazzi, C., Marchesi, C., Iacobone, G., Peng, Xu, Bonch-Osmolovskaya, E., Wohlgemuth, R., Littlechild, J. A. & Monti, D., 2015, In: F E B S Journal. 282, 15, p. 2879-2894 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Control regions for chromosome replication are conserved with respect to sequence and location among Escherichia coli strains
Frimodt-Møller, Jakob, Charbon, Godefroid, Krogfelt, K. A. & Løbner-Olesen, Anders, 2015, In: Frontiers in Microbiology. 6, 15 p., 1011.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Initiation of Replication in Escherichia coli: A Comprehensive Study in Regulation of Initiation and the Interlink to Chromosomal Organization
Frimodt-Møller, Jakob, 2015, Department of Biology, Faculty of Science, University of Copenhagen. 205 p.Research output: Book/Report › Ph.D. thesis › Research
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Receptor-like kinase complexes in plant innate immunity
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MAP kinase cascades in Arabidopsis innate immunity
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relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data
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Bacterial chromosomes and their replication
Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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