Functional Genomics

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  1. 2005
  2. Published

    Brh2-Dss1 interplay enables properly controlled recombination in Ustilago maydis.

    Kojic, M., Zhou, Q., Lisby, Michael & Holloman, W. K., 2005, In: Molecular and Cellular Biology. 25, 7, p. 2547-57 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Cancer cells become susceptible to natural killer cell killing after exposure to histone deacetylase inhibitors due to glycogen synthase kinase-3-dependent expression of MHC class I-related chain A and B

    Skov, Søren, Pedersen, M. T., Andresen, Lars, Straten, P. T., Woetmann, Anders & Ødum, Niels, 2005, In: Cancer Research. 65, 23, p. 11136-45 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Conditional E2F1 activation in transgenic mice causes testicular atrophy and dysplasia mimicking human CIS.

    Agger, K., Santoni Rugiu, Eric, Holmberg, Christian, Karlström, O. & Helin, K., 2005, In: Oncogene. 24, 5, p. 780-9 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Constitutive SOCS-3 expression protects T-cell lymphoma against growth inhibition by IFNalpha

    Brender, C., Lovato, P., Sommer, V. H., Woetmann, Anders , Mathiesen, A., Geisler, Carsten, Wasik, M. & Ødum, Niels, 2005, In: Leukemia. 19, 2, p. 209-13 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

    Siepel, A., Bejerano, G., Pedersen, Jakob Skou, Hinrichs, A. S., Hou, M., Rosenbloom, K., Clawson, H., Spieth, J., Hillier, L. W., Richards, S., Weinstock, G. M., Wilson, R. K., Gibbs, R. A., Kent, W. J., Miller, W. & Haussler, D., 2005, In: Genome Research. 15, 8, p. 1034-50 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures

    Häring, M., Vestergaard, G. A., Brügger, K., Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2005, In: Journal of Bacteriology. 187, 11, p. 3855-8 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The 3' region of human papillomavirus type 16 early mRNAs decrease expression

    Vinther, Jeppe, Rosenstierne, M. W., Kristiansen, K. & Norrild, B., 2005, In: BMC Infectious Diseases. 5, p. 83

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The MAP kinase substrate MKS1 is a regulator of plant defense responses.

    Andreasson, E., Jenkins, T., Brodersen, P., Thorgrimsen, S., Petersen, N. H. T., Zhu, S., Qiu, J., Micheelsen, P., Rocher, A., Petersen, Morten, Newman, Mari-Anne, Bjørn Nielsen, H., Hirt, H., Somssich, I., Mattsson, O. & Mundy, J., 2005, In: EMBO Journal. 24, 14, p. 2579-89 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The role of salicylic acid in the induction of cell death in Arabidopsis acd11

    Brodersen, K. P., Malinovsky, F. G., Hématy, K., Newman, Mari-Anne & Mundy, J., 2005, In: Plant Physiology. 138, 2, p. 1037-1045 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Virology: Independent virus development outside a host

    Häring, M., Vestergaard, G. A., Rachel, R., Chen, L., Garrett, Roger Antony & Prangishvili, D., 2005, In: Nature. 436, 7054, p. 1101-1102

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Grr1p is required for transcriptional induction of amino acid permease genes and proper transcriptional regulation of genes in carbon metabolism of Saccharomyces cerevisiae

    Eckert-Boulet, N., Regenberg, Birgitte & Nielsen, J., 1 Mar 2005, In: Current Genetics. 47, 3, p. 139-149 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Myocardial perfusion defects and the left ventricular ejection fraction disclosed by scintigraphy in patients with primary hyperparathyroidism

    Ogard, C. G., Søndergaard, S. B., drb459, drb459, Jakobsen, H., Nielsen, S. L. & drb459, drb459, Jul 2005, In: World Journal of Surgery. 29, 7, p. 914-6 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Neuropsychological assessment of chronic non-malignant pain patients treated in a multidisciplinary pain centre

    Sjøgren, P., Christrup, Lona Louring, Petersen, Morten & Højsted, J., Aug 2005, In: European Journal of Pain. 9, 4, p. 453-62 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. 2006
  16. Published

    A putative flavin-containing mono-oxygenase as a marker for certain defense and cell death pathways

    Olszak, B., Malinovsky, F. G., Brodersen, P., Grell, M., Giese, H., Petersen, Morten & Mundy, J., 2006, In: Plant Science. 170, 3, p. 614-623

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    A putative viral defence mechanism in archaeal cells

    Lillestøl, R. K., Redder, P., Garrett, Roger Antony & Brügger, K., 2006, In: Archaea. 2, 1, p. 59-72 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    An RNA gene expressed during cortical development evolved rapidly in humans.

    Pollard, K. S., Salama, S. R., Lambert, N., Lambot, M., Coppens, S., Pedersen, Jakob Skou, Katzman, S., King, B., Onodera, C., Siepel, A., Kern, A. D., Dehay, C., Igel, H., Ares, M., Vanderhaeghen, P. & Haussler, D., 2006, In: Nature. 443, 7108, p. 167-72 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4

    Brodersen, K. P., Petersen, Morten, Nielsen, H. B., Zhu, S., Newman, Mari-Anne, Shokat, K. M., Rietz, S., Parker, J. & Mundy, J., 2006, In: Plant Journal. 47, 4, p. 532-546 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Crystallization and preliminary X-ray diffraction analysis of protein 14 from Sulfolobus islandicus filamentous virus (SIFV)

    Goulet, A., Spinelli, S., Campanacci, V., Porciero, S., Blangy, S., Garrett, Roger Antony, van Tilbeurgh, H., Leulliot, N., Basta, T., Prangishvili, D. & Cambillau, C., 2006, In: Acta Crystallographica. Section F : Structural Biology and Crystallization Communications. 62, Pt 9, p. 884-886 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Dynamic usage of transcription start sites within core promoters.

    Kawaji, H., Frith, M. C., Katayama, S., Sandelin, Albin Gustav, Kai, C., Kawai, J., Carninci, P. & Hayashizaki, Y., 2006, In: Genome Biology. 7, 12, p. R118

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Forces shaping the fastest evolving regions in the human genome.

    Pollard, K. S., Salama, S. R., King, B., Kern, A. D., Dreszer, T., Katzman, S., Siepel, A., Pedersen, Jakob Skou, Bejerano, G., Baertsch, R., Rosenbloom, K. R., Kent, J. & Haussler, D., 2006, In: PLoS Genetics. 2, 10, p. e168

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions

    Zhu, X., Wirén, M., Sinha, I., Rasmussen, N. N., Linder, T., Holmberg, Steen, Ekwall, K. & Gustafsson, C. M., 2006, In: Molecular Cell. 22, 2, p. 169-78 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    How to induce non-polarized cells of hepatic origin to express typical hepatocyte polarity: generation of new highly polarized cell models with developed and functional bile canaliculi

    Peng, Xu & Grosse B, Le Tiec B, Nicolas V, Delagebeaudeuf C, Bedda T, Decaens C, Cassio D, G. B. L. T. B. N. V. D. C. B. T. D. C. C. D., 2006, In: Cell and Tissue Research.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Hybridization between subspecies of waterbuck (Kobus ellipsiprymnus) in zones of overlap with limited introgression

    Lorenzen, Eline, Simonsen, Bo Thisted, Kat, P. W., Arctander, P. & Siegismund, Hans Redlef, 2006, In: Molecular Ecology. 15, 12, p. 3787-99 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Identification and classification of conserved RNA secondary structures in the human genome.

    Pedersen, Jakob Skou, Bejerano, G., Siepel, A., Rosenbloom, K., Lindblad-Toh, K., Lander, E. S., Kent, J., Miller, W. & Haussler, D., 2006, In: PLoS Computational Biology. 2, 4, p. e33

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Identification of miRNA targets with stable isotope labeling by amino acids in cell culture.

    Vinther, Jeppe, Hedegaard, M. M., Gardner, P. P., Andersen, J. S. & Arctander, P., 2006, In: Nucleic Acids Research. 34, 16, p. e107

    Research output: Contribution to journal › Journal article › Research › peer-review

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