- 2009
- Published
Dioxin increases the interaction between aryl hydrocarbon receptor and estrogen receptor alpha at human promoters
Ahmed, S., Valen, E., Sandelin, Albin Gustav & Matthews, J., 2009, In: Toxicological Sciences. 111, 2, p. 254-266Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovery of regulatory elements is improved by a discriminatory approach
Valen, E., Sandelin, Albin Gustav, Winther, Ole & Krogh, Anders, 2009, In: PLoS Computational Biology. 5, 11, p. e1000562Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism
Shah, S. A., Hansen, Niels Richard & Garrett, Roger Antony, 2009, In: Biochemical Society Transactions. 37, Pt 1, p. 23-8 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dpb11/TopBP1 contributes to genomicstability via homologous recombinationand checkpoint signaling
Germann, S. M., 2009, Biologisk Institut: Museum Tusculanum. 175 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates
Irimia, M., Rukov, J. L. & Roy, S. W., 2009, In: PLoS ONE. 4, 6, p. e5800Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fish protein hydrolysate elevates plasma bile acids and reduces visceral adipose tissue mass in rats
Liaset, B., Madsen, L., Hao, Q., Criales, G., Mellgren, G., Marschall, H., Hallenborg, P., Espe, M., Frøyland, L. & Kristiansen, Karsten, 2009, In: BBA General Subjects. 1791, 4, p. 254-62 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism
Redder, P., Peng, Xu, Brügger, K., Shah, S. A., Roesch, F., Greve, B., She, Q., Schleper, C., Forterre, P., Garrett, Roger Antony & Prangishvili, D., 2009, In: Environmental Microbiology. 11, 11, p. 2849-62 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene regulation by MAP kinase cascades
Fiil, Berthe Katrine, Petersen, K., Petersen, Morten & Mundy, J., 2009, In: Current Opinion in Plant Biology. 12, 5, p. 615-621 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicus
She, Q., Zhang, C., Deng, L., Peng, N., Chen, Z. & Liang, Y. X., 2009, In: Biochemical Society Transactions. 37, Pt 1, p. 92-6 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic diversity and phylogenetic analysis of the attachment glycoprotein of phocine distemper viruses of the 2002 and 1988 epizootics
Nielsen, L., Arctander, P., Jensen, T. H., Dietz, Hans Henrik, Hammer, A. S., Banyard, A., Barrett, T. & Blixenkrone-Møller, M., 2009, In: Virus Research. 144, 1-2, p. 323-328 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
Valen, E., Pascarella, G., Chalk, A., Maeda, N., Kojima, M., Kawazu, C., Murata, M., Nishiyori, H., Lazarevic, D., Motti, D., Marstrand, T. T., Tang, M-H. E., Zhao, X., Krogh, A., Winther, O., Arakawa, T., Kawai, J., Wells, C., Daub, C., Harbers, M. & 4 others, , 2009, In: Genome Research. 19, 2, p. 255-65 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Haploinsufficiency of the retinoblastoma protein gene reduces diet-induced obesity, insulin resistance, and hepatosteatosis in mice
Mercader, J., Ribot, J., Murano, I., Feddersen, S., Cinti, S., Madsen, L., Kristiansen, Karsten, Bonet, M. L. & Palou, A., 2009, In: American Journal of Physiology: Endocrinology and Metabolism. 297, 1, p. E184-E193Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput screening of Erwinia chrysanthemi pectin methylesterase variants using carbohydrate microarrays
Øbro, J., Sørensen, I., Derkx, P., Madsen, C. T., Drews, M., Willer, M., Mikkelsen, J. D. & Willats, W. G. T., 2009, In: Proteomics - Practical Proteomics. 9, 7, p. 1861-1868Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing
Nygaard, S., Jacobsen, A., Lindow, M., Eriksen, J., Balslev, E., Flyger, H., Tolstrup, N., Moller, S., Krogh, Anders & Litman, T., 2009, In: B M C Medical Genomics. 2, 1, p. 35Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification and characterization of barley RNA-directed RNA polymerases
Madsen, C. T., Stephens, J., Hornyik, C., Shaw, J., Collinge, David B., Lacomme, C. & Albrechtsen, M. T., 2009, In: BBA General Subjects. 1789, 5, p. 375-385 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of proteins interacting with Arabidopsis ACD11.
Petersen, N. H. T., Joensen, J., McKinney, L. V., Brodersen, P., Petersen, Morten, Hofius, D. & Mundy, J., 2009, In: Journal of Plant Physiology. 166, 6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigating non-coding genome content using high-throughput sequencing data
Nygaard, S., 2009, Biologisk Institut: Museum Tusculanum. 34 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
Portales-Casamar, E., Thongjuea, S., Kwon, A. T., Arenillas, D., Zhao, X., Valen, E., Yusuf, D., Lenhard, B., Wasserman, W. W. & Sandelin, Albin Gustav, 2009, In: Nucleic Acids Research.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Localization of recombination proteins and Srs2 reveals anti-recombinase function in vivo
Burgess, R. C., Lisby, Michael, Altmannova, V., Krejci, L., Sung, P. & Rothstein, R., 2009, In: Journal of Cell Biology. 185, 6, p. 969-81 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1
Basta, T., Smyth, J., Forterre, P., Prangishvili, D. & Peng, Xu, 2009, In: Molecular Microbiology. 71, 1, p. 23-34 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel death regulators in plant immunity
Malinovsky, F. G., 2009, Biologisk Institut: Museum Tusculanum. 55 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Polypeptides comprising an ice-binding activity
Ramløv, H., Wilkens, C. & Løbner-Olesen, Anders, 2009, Patent No. WO/2009/065415Research output: Patent
- Published
Posttranscriptional crossregulation between Drosha and DGCR8
Han, J., Pedersen, Jakob Skou, Kwon, S. C., Belair, C. D., Kim, Y., Yeom, K., Yang, W., Haussler, D., Blelloch, R. & Kim, V. N., 2009, In: Cell. 136, 1, p. 75-84 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteins involved in attack and defence in Zygomycete-aphid interactions
Grell, M. N., Jensen, Annette Bruun & Lange, L., 2009.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Quantitative analysis of promoter architecture and gene regulation
Marstrand, T. T., 2009, Biologisk Institut: Museum Tusculanum. 33 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Quantitative regulation of alternative splicing in evolution and development
Irimia, M., Rukov, J. L., Roy, S. W., Vinther, Jeppe & Garcia-Fernandez, J., 2009, In: BioEssays. 31, 1, p. 40-50 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RSK is a principal effector of the RAS-ERK pathway for eliciting a coordinate promotile/invasive gene program and phenotype in epithelial cells
Doehn, U., Hauge, C., Frank, S. R., Jensen, C. A. J., Duda, K., Nielsen, J. V., Cohen, M. S., Johansen, Jens Vilstrup, Winther, B. R., Lund, L. R., Winther, Ole, Taunton, J., Hansen, S. H. & Frödin, Morten, 2009, In: Molecular Cell. 35, 4, p. 511-22 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rad10 exhibits lesion-dependent genetic requirements for recruitment to DNA double-strand breaks in Saccharomyces cerevisiae
Moore, D. M., Karlin, J., González-Barrera, S., Mardiros, A., Lisby, Michael, Doughty, A., Gilley, J., Rothstein, R., Friedberg, E. C. & Fischhaber, P. L., 2009, In: Nucleic Acids Research. 37, 19, p. 6429-38 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rad52
Mortensen, U. H., Lisby, Michael & Rothstein, R., 2009, In: Current Biology. 19, 16, p. R676-7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of rDNA stability by sumoylation
Eckert-Boulet, N. & Lisby, Michael, 2009, In: DNA Repair. 8, 4, p. 507-16 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Response to Comment by Goldberg et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"
Rasmussen, M., Cummings, L., Gilbert, M Thomas P, Bryant, V., Smith, C., Jenkins, D. & Willerslev, Eske, 2009, In: Science. 325, p. 148 1 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Response to Comment by Poinar et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"
Gilbert, M Thomas P, Jenkins, D., Higham, T., Rasmussen, M., Malmstrom, H., Svensson, E., Sanchez, J., Cummings, L., Yohe, I. R., Hofreiter, M., Götherström, A. & Willerslev, Eske, 2009, In: Science. 325, 5937, p. 148 1 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Self-consuming innate immunity in Arabidopsis
Hofius, D., Mundy, J. & Petersen, Morten, 2009, In: Autophagy. 5, 8, p. 1206-7 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The DNA damage response at eroded telomeres and tethering to the nuclear pore complex
Khadaroo, B., Teixeira, M. T., Luciano, P., Eckert-Boulet, N., Germann, S. M., Simon, M. N., Gallina, I., Abdallah, P., Gilson, E., Géli, V. & Lisby, Michael, 2009, In: Nature Cell Biology. 11, 8, p. 980-7 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients
Holden, M. T. G., Seth-Smith, H. M. B., Crossman, L. C., Sebaihia, M., Bentley, S. D., Cerdeño-Tárraga, A. M., Thomson, N. R., Bason, N., Quail, M. A., Sharp, S., Cherevach, I., Churcher, C., Goodhead, I., Hauser, H., Holroyd, N., Mungall, K., Scott, P., Walker, D., White, B., Rose, H. & 12 others, , 2009, In: Journal of Bacteriology. 191, 1, p. 261-77 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The life-cycle of ATV and other crenarchaeal viruses
Vestergaard, G. A., 2009, Biologisk Institut: Museum Tusculanum. 91 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
Klasson, L., Westberg, J., Sapountzis, P., Näslund, K., Lutnaes, Y., Darby, A. C., Veneti, Z., Chen, L., Braig, H. R., Garrett, Roger Antony, Bourtzis, K. & Andersson, S. G. E., 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 14, p. 5725-5730Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Suzuki, H., Forrest, A. R. R., van Nimwegen, E., Daub, C. O., Balwierz, P. J., Irvine, K. M., Lassmann, T., Ravasi, T., Hasegawa, Y., de Hoon, M. J. L., Katayama, S., Schroder, K., Carninci, P., Tomaru, Y., Kanamori-Katayama, M., Kubosaki, A., Akalin, A., Ando, Y., Arner, E., Asada, M. & 31 others, , 2009, In: Nature Genetics. 41, 5, p. 553-62 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus
Deng, L., Zhu, H., Chen, Z., Liang, Y. X. & She, Q., 2009, In: Extremophiles. 13, 4, p. 735-46 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vesicles in electric fields: some novel aspects of membrane behavior
Dimova, R., Bezlyepkina, N. & Domange Jordö, M. E., 2009, In: Soft Matter. 5, 17, p. 3201-3212 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viruses of the Archaea
Basta, T., Garrett, Roger Antony & Prangishvili, D., 2009, Encyclopedia of Life Sciences. Wiley, p. 1-8Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research
- Published
Where sociality and relatedness diverge: the genetic basis for hierarchical social organization in African elephants
Wittemyer, G., Okello, J. B. A., Rasmussen, H. B., Arctander, P., Nyakaana, S., Douglas-Hamilton, I. & Siegismund, Hans Redlef, 2009, In: PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES B-CONTAINING PAPERS OF A BIOLOGICAL CHARACTER. 276, 1672, p. 3513-3521Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Seawater-regulated genes for two-component systems and outer membrane proteins in myxococcus
Pan, H. W., Liu, H., Liu, T., Li, C. Y., Li, Z. F., Cai, K., Zhang, C. Y., ZHANG, YONG, Hu, W., Wu, Z. H. & Li, Y. Z., Apr 2009, In: Journal of Bacteriology. 191, 7, p. 2102-2111 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2010
- Published
A long-standing Pleistocene refugium in southern Africa and a mosaic of refugia in East Africa: insights from mtDNA and the common eland antelope
Lorenzen, Eline, Masembe, C., Arctander, P. & Siegismund, Hans Redlef, 2010, In: Journal of Biogeography. 37, 3, p. 571-581 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus
Gresham, D., Usaite, R., Germann, S. M., Lisby, Michael, Botstein, D. & Regenberg, Birgitte, 2010, In: Proceedings of the National Academy of Science of the United States of America. 107, 43, p. 18551-6 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene expression analysis of the emergence of epileptiform activity after focal injection of kainic acid into mouse hippocampus
Motti, D., Le Duigou, C., Eugène, E., Chemaly, N., Wittner, L., Lazarevic, D., Krmac, H., Marstrand, T., Valen, E., Sanges, R., Stupka, E., Sandelin, Albin Gustav, Cherubini, E., Gustincich, S. & Miles, R., 2010, In: European Journal of Neuroscience. 32, 8, p. 1364-79 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gene expression profiles in rice roots under low phosphorus stress
Li, L., Liu, C. & Lian, X., 2010, In: Plant Molecular Biology. 72, 4-5, p. 423-432 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV
Goulet, A., Vestergaard, G. A., Felisberto-Rodrigues, C., Campanacci, V., Garrett, Roger Antony, Cambillau, C. & Ortiz-Lombardía, M., 2010, In: Acta Crystallographica. Section D: Biological Crystallography. 66, Pt 3, p. 304-308 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insights into the structure, function and evolution of the radical-SAM 23S rRNA methyltransferase Cfr that confers antibiotic resistance in bacteria
Kaminska, K. H., Purta, E., Hansen, L. H., Bujnicki, J. M., Vester, B. & Long, K. S., 2010, In: Nucleic Acids Research. 38, 5, p. 1652-1663 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lazarus1, a DUF300 protein, contributes to programmed cell death associated with Arabidopsis acd11 and the hypersensitive response
Malinovsky, F. G., Brodersen, P., Fiil, Berthe Katrine, McKinney, L. V., Thorgrimsen, S., Beck, M., Nielsen, H. B., Pietra, S., Zipfel, C., Robatzek, S., Petersen, Morten, Hofius, D. & Mundy, J., 2010, In: P L o S One. 5, 9, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
MicroRNA-145 targets YES and STAT1 in colon cancer cells
Gregersen, Lea Haarup, Jacobsen, A. B., Frankel, Lisa, Wen, J., Krogh, Anders & Lund, Anders H., 2010, In: PLoS ONE. 5, 1, p. e8836Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitogen-activated protein kinase signaling in plants
Rodriguez, M. C. S., Petersen, Morten & Mundy, J., 2010, In: Annual Review of Plant Biology. 61, 1, p. 621-649 29 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mutations in 23S rRNA at the peptidyl transferase center and their relationship to linezolid binding and cross-resistance
Long, K. S., Munck, C., Andersen, T. M. B., Schaub, M. A., Hobbie, S. N., Böttger, E. C. & Vester, B., 2010, In: Antimicrobial Agents and Chemotherapy. 54, 11, p. 4705-4713 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
NAC genes: Time-specific regulators of hormonal signaling in Arabidopsis
Jensen, M. K., Kjærsgaard, T., Petersen, K. & Skriver, Karen, 2010, In: Plant Signalling & Behavior. 5, 7, 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Persistent Organic Pollutant Exposure Leads to Insulin Resistance Syndrome
Ruzzin, J., Petersen, R., Meugnier, E., Madsen, L., Lock, E., Lillefosse, H., Ma, T., Pesenti, S., Sonne, Si Brask, Marstrand, T. T., Malde, M. K., Du, Z., Chavey, C., Fajas, L., Lundebye, A., Brand, C. L., Vidal, H., Kristiansen, Karsten & Frøyland, L., 2010, In: Environmental Health Perspectives. 118, 4, p. 465-71Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rad52 SUMOylation affects the efficiency of the DNA repair: [Inkl. Corrigendum]
Altmannova, V., Eckert-Boulet, N., Arneric, M., Kolesar, P., Chaloupkova, R., Damborsky, J., Sung, P., Zhao, X., Lisby, Michael & Krejci, L., 2010, In: Nucleic Acids Research. 38, 14, p. 4708-4721 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The fate of irreparable DNA double-strand breaks and eroded telomeres at the nuclear periphery
Lisby, Michael, Teixeira, T., Gilson, E. & Géli, V., 2010, In: Nucleus (Austin, Tex.). 1, 2, p. 158-161 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The rad52-Y66A allele alters the choice of donor template during spontaneous chromosomal recombination
de Mayolo, A. A., Sunjevaric, I., Reid, R., Mortensen, U. H., Rothstein, R. & Lisby, Michael, 2010, In: DNA Repair. 9, 1, p. 23-32Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using transcriptomics to identify and validate novel biomarkers of human skeletal muscle cancer cachexia
Stephens, N. A., Gallagher, I. J., Rooyackers, O., Skipworth, R. J., Tan, B. H., Marstrand, T. T., Ross, J. A., Guttridge, D. C., Lundell, L., Fearon, K. C. & Timmons, J. A., 2010, In: Genome Medicine. 2, 12 p., 1.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
miRMaid: a unified programming interface for microRNA data resources
Jacobsen, A., Krogh, Anders, Kauppinen, S. & Lindow, M., 2010, In: BMC Bioinformatics. 11, Suppl 1, p. 29Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arabidopsis MKS1 is involved in basal immunity and requires an intact N-terminal domain for proper function
Petersen, K., Qiu, J., Lütje, J., Fiil, Berthe Katrine, Hansen, S., Mundy, J. & Petersen, Morten, 1 Jan 2010, In: P L o S One. 5, 12, p. e14364Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Autoimmunity in Arabidopsis acd11 is mediated by epigenetic regulation of an immune receptor
Palma, K., Thorgrimsen, S., Malinovsky, F. G., Fiil, Berthe Katrine, Nielsen, H. B., Brodersen, P., Hofius, D., Petersen, Morten & Mundy, J., 1 Jan 2010, In: P L o S Pathogens. 6, 10Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Erratum: A two-step model for senescence triggered by a single critically short telomere: (Nature Cell Biol. (2009) 11 (988-993))
Abdallah, P., Luciano, P., Runge, K. W., Lisby, Michael, Géli, V., Gilson, E. & Teixeira, M. T., May 2010, In: Nature Cell Biology. 12, 5, p. 520 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Familial relationships in hyperthermo- and acidophilic archaeal viruses
Happonen, L. J., Redder, P., Peng, Xu, Reigstad, L. J., Prangishvili, D. & Butcher, S. J., 1 May 2010, In: Journal of Virology. 84, 9, p. 4747-54 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RNAi and heterochromatin repress centromeric meiotic recombination
Ellermeier, C., Higuchi, E. C., Phadnis, N., Holm, L., Geelhood, J. L., Thon, Genevieve & Smith, G. R., 11 May 2010, In: Proceedings of the National Academy of Sciences USA (PNAS). 107, 19, p. 8701-5 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of ribonucleotide reductase by Spd1 involves multiple mechanisms
Nestoras, K., Mohammed, A. H., Schreurs, A., Fleck, O., Watson, A. T., Poitelea, M., O'Shea, Charlotte, Chahwan, C., Holmberg, Christian, Kragelund, Birthe Brandt, Nielsen, Olaf, Osborne, M., Carr, A. M. & Liu, C., 1 Jun 2010, In: Genes & Development. 24, 11, p. 1145-1159 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Scottish Structural Proteomics Facility: targets, methods and outputs
Oke, M., Carter, L. G., Johnson, K. A., Liu, H., McMahon, S. A., Yan, X., Kerou, M., Weikart, N. D., Kadi, N., Sheikh, M. A., Schmelz, S., Dorward, M., Zawadzki, M., Cozens, C., Falconer, H., Powers, H., Overton, I. M., van Niekerk, C. A. J., Peng, X., Patel, P. & 11 others, , 1 Jun 2010, In: Journal of Structural and Functional Genomics. 11, 2, p. 167-80 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A bacterial ras-like small GTP-binding protein and its cognate GAP establish a dynamic spatial polarity axis to control directed motility
ZHANG, YONG, Franco, M., Ducret, A. & Mignot, T., Jul 2010, In: PLOS Biology. 8, 7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptomes of the desiccation-tolerant resurrection plant Craterostigma plantagineum
Suarez Rodriguez, M. C., Edsgärd, D., Hussain, S. S., Alquezar Planas, D. E., Rasmussen, M., Gilbert, M Thomas P, Nielsen, B. H., Bartels, D. & Mundy, J., Jul 2010, In: The Plant Journal. 63, 2, p. 212-228 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
[Pregnancy within the uterine scar of a prior Caesarean section].
Hartwell, D., Hoffmann, Eva, Krebs, Lone, Langhoff-Roos, J. & Petersen, K., Aug 2010, In: Ugeskrift for Laeger.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus
Contursi, P., Cannio, R. & She, Q., 1 Sep 2010, In: Extremophiles. 14, 5, p. 453-63 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of homologous recombination at telomeres in budding yeast
Eckert-Boulet, N. & Lisby, Michael, 10 Sep 2010, In: F E B S Letters. 584, 17, p. 3696-3702 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Revealing the essentiality of multiple archaeal pcna genes using a mutant propagation assay based on an improved knockout method
Zhang, C., Guo, L., Deng, L., Wu, Y., Liang, Y., Huang, L. & She, Q., Nov 2010, In: Microbiology. 156, Part 11Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles
Garrett, Roger Antony, Prangishvili, D., Shah, S. A., Reuter, M., Stetter, K. O. & Peng, Xu, 1 Nov 2010, In: Environmental Microbiology. 12, 11, p. 2918-30 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Break-induced ATR and Ddb1-Cul4(Cdt)² ubiquitin ligase-dependent nucleotide synthesis promotes homologous recombination repair in fission yeast
Moss, J., Tinline-Purvis, H., Walker, C. A., Folkes, L. K., Stratford, M. R., Hayles, J., Hoe, K., Kim, D., Park, H., Kearsey, S. E., Fleck, O., Holmberg, Christian, Nielsen, Olaf & Humphrey, T. C., 1 Dec 2010, In: Genes & Development. 24, 23, p. 2705-16 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The transcription elongation factor Bur1-Bur2 interacts with replication protein A and maintains genome stability during replication stress
Clausing, E., Mayer, A., Chanarat, S., Müller, B., Germann, S. M., Cramer, P., Lisby, Michael & Strässer, K., 31 Dec 2010, In: Journal of Biological Chemistry. 285, 53, p. 41665-41674 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2011
- Published
A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication
Oke, M., Kerou, M., Liu, H., Peng, Xu, Garrett, Roger Antony, Prangishvili, D., Naismith, J. H. & White, M. F., 2011, In: Journal of Virology. 85, 2, p. 925-31 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
AAA ATPase p529 of Acidianus two-tailed virus ATV and host receptor recognition
Erdmann, S., Scheele, U. & Garrett, Roger Antony, 2011, In: Virology. 421, 1, p. 61-66 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Archaeal CRISPR-based immune systems: exchangeable functional modules
Garrett, Roger Antony, Vestergaard, G. A. & Shah, S. A., 2011, In: Trends in Microbiology. 19, 11, p. 549-56 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Bird and plant companion species predict breeding and migrant habitats of the genus Oenanthe
Pentzold, S., Pentzold, C. & Randler, C., 2011, In: Journal of Ecology and Field Biology. 34, 3, p. 287-293 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
C68 from the Sulfolobus islandicus plasmid-virus pSSVx is a novel member of the AbrB-like transcription factor family
Contursi, P., D'Ambrosio, K., Pirone, L., Pedone, E., Aucelli, T., She, Q., De Simone, G. & Bartolucci, S., 2011, In: Biochemical Journal. 435, 1, p. 157-66 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-based immune systems of the Sulfolobales: complexity and diversity
Garrett, Roger Antony, Shah, S. A., Vestergaard, G. A., Deng, Ling, Guðbergsdóttir, S. R., Kenchappa, C. S., Erdmann, S. & She, Q., 2011, In: Biochemical Society Transactions. 39, 1, p. 51-57 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems
Shah, S. A. & Garrett, Roger Antony, 2011, In: Research in Microbiology. 162, 1, p. 27-38 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell biology of homologous recombination in yeast
Eckert-Boulet, N. V., Rothstein, R. & Lisby, Michael, 2011, DNA recombination: methods and protocols. Tsubouchi, H. (ed.). Springer, p. 523-536 14 p. (Methods in Molecular Biology, Vol. 745).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Chaperone role for proteins p618 and p892 in the extracellular tail development of Acidianus two-tailed virus
Scheele, U., Erdmann, S., Ungewickell, E. J., Felisberto-Rodrigues, C., Ortiz-Lombardía, M. & Garrett, Roger Antony, 2011, In: Journal of Virology. 85, 10, p. 4812-4821 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deletion of the topoisomerase III gene in the hyperthermophilic archaeon Sulfolobus islandicus results in slow growth and defects in cell cycle control
Li, X., Guo, L., Deng, Ling, Feng, D., Ren, Y., Chu, Y., She, Q. & Huang, L., 2011, In: Journal of Genetics and Genomics. 38, 6, p. 253-9 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dpb11/TopBP1 plays distinct roles in DNA replication, checkpoint response and homologous recombination
Germann, S. M., Østergaard, Vibe Hallundbæk, Haas, C., Salis, P., Motegi, A. & Lisby, Michael, 2011, In: D N A Repair. 10, 2, p. 210-224 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers
Guðbergsdóttir, S. R., Deng, L., Chen, Z., Jensen, J. V. K., Jensen, L. R., She, Q. & Garrett, Roger Antony, 2011, In: Molecular Microbiology. 79, 1, p. 35-49 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Generative probabilistic models extend the scope of inferential structure determination
Olsson, S., Boomsma, Wouter, Frellsen, J., Bottaro, S., Harder, T. P., Ferkinghoff-Borg, J. & Hamelryck, Thomas Wim, 2011, In: Journal of Magnetic Resonance. 213, 1, p. 182-186 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles
You, X. Y., Liu, C., Wang, S. Y., Jiang, C. Y., Shah, S. A., Prangishvili, D., She, Q., Liu, S. J. & Garrett, Roger Antony, 2011, In: Extremophiles. 15, p. 487-497 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
H3K9me-independent gene silencing in fission yeast heterochromatin by Clr5 and histone deacetylases
Hansen, K. R., Hazan, I., Shanker, S., Watt, S., Hansen, J. V., Bähler, J., Martienssen, R. A., Partridge, J. F., Cohen, A. & Thon, Genevieve, 2011, In: P L o S Genetics. 7, 1, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Morphological classification of plant cell deaths
van Doorn, W. G., Beers, E. P., Dangl, J. L., Franklin-Tong, V. E., Gallois, P., Hara-Nishimura, I., Jones, A. M., Kawai-Yamada, M., Lam, E., Mundy, J., Mur, L. A. J., Petersen, Morten, Smertenko, A., Taliansky, M., Van Breusegem, F., Wolpert, T., Woltering, E., Zhivotovsky, B. & Bozhkov, P. V., 2011, In: Cell Death and Differentiation. 18, 8, p. 1241-1246 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleotide diversity and linkage disequilibrium of nine genes with putative effects on flowering time in perennial ryegrass (Lolium perenne L.)
Fiil, A., Lenk, I., Petersen, K., Jensen, C. S., Nielsen, K. K., Schejbel, B., Andersen, J. R. & Lübberstedt, T., 2011, In: Plant Science. 180, 2, p. 228-237 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phenotypic, proteomic, and genomic characterization of a putative ABC-transporter permease involved in Listeria monocytogenes biofilm formation
Zhu, X., Liu, W., Lametsch, Rene, Aarestrup, F. M., Shi, C., She, Q., Shi, X. & Knoechel, Susanne, 2011, In: Foodborne Pathogens and Disease. 8, 4, p. 495-501 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phenylbutyrate inhibits homologous recombination induced by camptothecin and methyl methanesulfonate
Kaiser, G. S., Germann, S. M., Westergaard, T. & Lisby, Michael, 2011, In: Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 713, 1-2, p. 64-75 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Role of autophagy in disease resistance and hypersensitive response-associated cell death
Hofius, D., Munch, D., Bressendorff, Simon, Mundy, J. & Petersen, Morten, 2011, In: Cell Death and Differentiation. 18, 8, p. 1257-1262 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Schizosaccharomyces pombe Mms1 channels repair of perturbed replication into Rhp51 independent homologous recombination
Vejrup-Hansen, R., Mizuno, K., Miyabe, I., Fleck, O., Holmberg, Christian, Murray, J. M., Carr, A. M. & Nielsen, Olaf, 2011, In: DNA Repair. 10, 3, p. 283-95 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Senescence-associated barley NAC (NAM, ATAF1,2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domain
Kjaersgaard, T., Jensen, M. K., Christiansen, M. W., Gregersen, P. L., Kragelund, Birthe Brandt & Skriver, Karen, 2011, In: Journal of Biological Chemistry. 286, 41, p. 35418-29 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)
Lintner, N. G., Kerou, M., Brumfield, S. K., Graham, S., Liu, H., Naismith, J. H., Sdano, M., Peng, N., She, Q., Copié, V., Young, M. J., White, M. F. & Lawrence, C. M., 2011, In: The Journal of Biological Chemistry. 286, 24, p. 21643-56 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sulfolobus Turreted Icosahedral Virus c92 Protein Responsible for the Formation of Pyramid-Like Cellular Lysis Structures
Snyder, J. C., Brumfield, S. K., Peng, N., She, Q. & Young, M. J., 2011, In: Journal of Virology. 85, 13, p. 6287-92 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Receptor-like kinase complexes in plant innate immunity
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MAP kinase cascades in Arabidopsis innate immunity
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relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data
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PICH deficiency limits the progression of MYC-induced B-cell lymphoma
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