Functional Genomics

Read more
301 - 350 out of 963Page size: 50
  1. 2009
  2. Published

    Dioxin increases the interaction between aryl hydrocarbon receptor and estrogen receptor alpha at human promoters

    Ahmed, S., Valen, E., Sandelin, Albin Gustav & Matthews, J., 2009, In: Toxicological Sciences. 111, 2, p. 254-266

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Discovery of regulatory elements is improved by a discriminatory approach

    Valen, E., Sandelin, Albin Gustav, Winther, Ole & Krogh, Anders, 2009, In: PLoS Computational Biology. 5, 11, p. e1000562

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism

    Shah, S. A., Hansen, Niels Richard & Garrett, Roger Antony, 2009, In: Biochemical Society Transactions. 37, Pt 1, p. 23-8 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Dpb11/TopBP1 contributes to genomicstability via homologous recombinationand checkpoint signaling

    Germann, S. M., 2009, Biologisk Institut: Museum Tusculanum. 175 p.

    Research output: Book/Report › Ph.D. thesis › Research

  6. Published

    Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates

    Irimia, M., Rukov, J. L. & Roy, S. W., 2009, In: PLoS ONE. 4, 6, p. e5800

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Fish protein hydrolysate elevates plasma bile acids and reduces visceral adipose tissue mass in rats

    Liaset, B., Madsen, L., Hao, Q., Criales, G., Mellgren, G., Marschall, H., Hallenborg, P., Espe, M., Frøyland, L. & Kristiansen, Karsten, 2009, In: BBA General Subjects. 1791, 4, p. 254-62 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism

    Redder, P., Peng, Xu, Brügger, K., Shah, S. A., Roesch, F., Greve, B., She, Q., Schleper, C., Forterre, P., Garrett, Roger Antony & Prangishvili, D., 2009, In: Environmental Microbiology. 11, 11, p. 2849-62 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Gene regulation by MAP kinase cascades

    Fiil, Berthe Katrine, Petersen, K., Petersen, Morten & Mundy, J., 2009, In: Current Opinion in Plant Biology. 12, 5, p. 615-621 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicus

    She, Q., Zhang, C., Deng, L., Peng, N., Chen, Z. & Liang, Y. X., 2009, In: Biochemical Society Transactions. 37, Pt 1, p. 92-6 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Genetic diversity and phylogenetic analysis of the attachment glycoprotein of phocine distemper viruses of the 2002 and 1988 epizootics

    Nielsen, L., Arctander, P., Jensen, T. H., Dietz, Hans Henrik, Hammer, A. S., Banyard, A., Barrett, T. & Blixenkrone-Møller, M., 2009, In: Virus Research. 144, 1-2, p. 323-328 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE

    Valen, E., Pascarella, G., Chalk, A., Maeda, N., Kojima, M., Kawazu, C., Murata, M., Nishiyori, H., Lazarevic, D., Motti, D., Marstrand, T. T., Tang, M-H. E., Zhao, X., Krogh, A., Winther, O., Arakawa, T., Kawai, J., Wells, C., Daub, C., Harbers, M. & 4 others, Hayashizaki, Y., Gustincich, S., Sandelin, Albin Gustav & Carninci, P., 2009, In: Genome Research. 19, 2, p. 255-65 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Haploinsufficiency of the retinoblastoma protein gene reduces diet-induced obesity, insulin resistance, and hepatosteatosis in mice

    Mercader, J., Ribot, J., Murano, I., Feddersen, S., Cinti, S., Madsen, L., Kristiansen, Karsten, Bonet, M. L. & Palou, A., 2009, In: American Journal of Physiology: Endocrinology and Metabolism. 297, 1, p. E184-E193

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    High-throughput screening of Erwinia chrysanthemi pectin methylesterase variants using carbohydrate microarrays

    Øbro, J., Sørensen, I., Derkx, P., Madsen, C. T., Drews, M., Willer, M., Mikkelsen, J. D. & Willats, W. G. T., 2009, In: Proteomics - Practical Proteomics. 9, 7, p. 1861-1868

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing

    Nygaard, S., Jacobsen, A., Lindow, M., Eriksen, J., Balslev, E., Flyger, H., Tolstrup, N., Moller, S., Krogh, Anders & Litman, T., 2009, In: B M C Medical Genomics. 2, 1, p. 35

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Identification and characterization of barley RNA-directed RNA polymerases

    Madsen, C. T., Stephens, J., Hornyik, C., Shaw, J., Collinge, David B., Lacomme, C. & Albrechtsen, M. T., 2009, In: BBA General Subjects. 1789, 5, p. 375-385 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Identification of proteins interacting with Arabidopsis ACD11.

    Petersen, N. H. T., Joensen, J., McKinney, L. V., Brodersen, P., Petersen, Morten, Hofius, D. & Mundy, J., 2009, In: Journal of Plant Physiology. 166, 6

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Investigating non-coding genome content using high-throughput sequencing data

    Nygaard, S., 2009, Biologisk Institut: Museum Tusculanum. 34 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

    Portales-Casamar, E., Thongjuea, S., Kwon, A. T., Arenillas, D., Zhao, X., Valen, E., Yusuf, D., Lenhard, B., Wasserman, W. W. & Sandelin, Albin Gustav, 2009, In: Nucleic Acids Research.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Localization of recombination proteins and Srs2 reveals anti-recombinase function in vivo

    Burgess, R. C., Lisby, Michael, Altmannova, V., Krejci, L., Sung, P. & Rothstein, R., 2009, In: Journal of Cell Biology. 185, 6, p. 969-81 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1

    Basta, T., Smyth, J., Forterre, P., Prangishvili, D. & Peng, Xu, 2009, In: Molecular Microbiology. 71, 1, p. 23-34 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Novel death regulators in plant immunity

    Malinovsky, F. G., 2009, Biologisk Institut: Museum Tusculanum. 55 p.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    Polypeptides comprising an ice-binding activity

    Ramløv, H., Wilkens, C. & Løbner-Olesen, Anders, 2009, Patent No. WO/2009/065415

    Research output: Patent

  24. Published

    Posttranscriptional crossregulation between Drosha and DGCR8

    Han, J., Pedersen, J. S., Kwon, S. C., Belair, C. D., Kim, Y., Yeom, K., Yang, W., Haussler, D., Blelloch, R. & Kim, V. N., 2009, In: Cell. 136, 1, p. 75-84 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Proteins involved in attack and defence in Zygomycete-aphid interactions

    Grell, M. N., Jensen, Annette Bruun & Lange, L., 2009.

    Research output: Contribution to conference › Conference abstract for conference › Research

  26. Published

    Quantitative analysis of promoter architecture and gene regulation

    Marstrand, T. T., 2009, Biologisk Institut: Museum Tusculanum. 33 p.

    Research output: Book/Report › Ph.D. thesis › Research

  27. Published

    Quantitative regulation of alternative splicing in evolution and development

    Irimia, M., Rukov, J. L., Roy, S. W., Vinther, Jeppe & Garcia-Fernandez, J., 2009, In: BioEssays. 31, 1, p. 40-50 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    RSK is a principal effector of the RAS-ERK pathway for eliciting a coordinate promotile/invasive gene program and phenotype in epithelial cells

    Doehn, U., Hauge, C., Frank, S. R., Jensen, C. A. J., Duda, K., Nielsen, J. V., Cohen, M. S., Johansen, Jens Vilstrup, Winther, B. R., Lund, L. R., Winther, Ole, Taunton, J., Hansen, S. H. & Frödin, Morten, 2009, In: Molecular Cell. 35, 4, p. 511-22 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Rad10 exhibits lesion-dependent genetic requirements for recruitment to DNA double-strand breaks in Saccharomyces cerevisiae

    Moore, D. M., Karlin, J., González-Barrera, S., Mardiros, A., Lisby, Michael, Doughty, A., Gilley, J., Rothstein, R., Friedberg, E. C. & Fischhaber, P. L., 2009, In: Nucleic Acids Research. 37, 19, p. 6429-38 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Rad52

    Mortensen, U. H., Lisby, Michael & Rothstein, R., 2009, In: Current Biology. 19, 16, p. R676-7

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Regulation of rDNA stability by sumoylation

    Eckert-Boulet, N. & Lisby, Michael, 2009, In: DNA Repair. 8, 4, p. 507-16 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Response to Comment by Goldberg et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"

    Rasmussen, M., Cummings, L., Gilbert, M Thomas P, Bryant, V., Smith, C., Jenkins, D. & Willerslev, Eske, 2009, In: Science. 325, p. 148 1 p.

    Research output: Contribution to journal › Comment/debate › Research

  33. Published

    Response to Comment by Poinar et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"

    Gilbert, M Thomas P, Jenkins, D., Higham, T., Rasmussen, M., Malmstrom, H., Svensson, E., Sanchez, J., Cummings, L., Yohe, I. R., Hofreiter, M., Götherström, A. & Willerslev, Eske, 2009, In: Science. 325, 5937, p. 148 1 p.

    Research output: Contribution to journal › Comment/debate › Research

  34. Published

    Self-consuming innate immunity in Arabidopsis

    Hofius, D., Mundy, J. & Petersen, Morten, 2009, In: Autophagy. 5, 8, p. 1206-7 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The DNA damage response at eroded telomeres and tethering to the nuclear pore complex

    Khadaroo, B., Teixeira, M. T., Luciano, P., Eckert-Boulet, N., Germann, S. M., Simon, M. N., Gallina, I., Abdallah, P., Gilson, E., Géli, V. & Lisby, Michael, 2009, In: Nature Cell Biology. 11, 8, p. 980-7 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients

    Holden, M. T. G., Seth-Smith, H. M. B., Crossman, L. C., Sebaihia, M., Bentley, S. D., Cerdeño-Tárraga, A. M., Thomson, N. R., Bason, N., Quail, M. A., Sharp, S., Cherevach, I., Churcher, C., Goodhead, I., Hauser, H., Holroyd, N., Mungall, K., Scott, P., Walker, D., White, B., Rose, H. & 12 others, Iversen, P., Mil-Homens, D., Rocha, E. P. C., Fialho, A. M., Baldwin, A., Dowson, C., Barrell, B. G., Govan, J. R., Vandamme, P., Hart, C. A., Mahenthiralingam, E. & Parkhill, J., 2009, In: Journal of Bacteriology. 191, 1, p. 261-77 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    The life-cycle of ATV and other crenarchaeal viruses

    Vestergaard, G. A., 2009, Biologisk Institut: Museum Tusculanum. 91 p.

    Research output: Book/Report › Ph.D. thesis › Research

  38. Published

    The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans

    Klasson, L., Westberg, J., Sapountzis, P., Näslund, K., Lutnaes, Y., Darby, A. C., Veneti, Z., Chen, L., Braig, H. R., Garrett, Roger Antony, Bourtzis, K. & Andersson, S. G. E., 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 14, p. 5725-5730

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

    Suzuki, H., Forrest, A. R. R., van Nimwegen, E., Daub, C. O., Balwierz, P. J., Irvine, K. M., Lassmann, T., Ravasi, T., Hasegawa, Y., de Hoon, M. J. L., Katayama, S., Schroder, K., Carninci, P., Tomaru, Y., Kanamori-Katayama, M., Kubosaki, A., Akalin, A., Ando, Y., Arner, E., Asada, M. & 31 others, Asahara, H., Bailey, T., Bajic, V. B., Bauer, D., Beckhouse, A. G., Bertin, N., Björkegren, J., Brombacher, F., Bulger, E., Chalk, A. M., Chiba, J., Cloonan, N., Dawe, A., Dostie, J., Engström, P. G., Essack, M., Faulkner, G. J., Fink, J. L., Fredman, D., Fujimori, K., Furuno, M., Gojobori, T., Gough, J., Grimmond, S. M., Jacobsen, A., Krogh, Anders, Nygaard, S., Sandelin, Albin Gustav, Valen, E., Winther, Ole & Riken Omics Science Center, R. O. S. C., 2009, In: Nature Genetics. 41, 5, p. 553-62 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus

    Deng, L., Zhu, H., Chen, Z., Liang, Y. X. & She, Q., 2009, In: Extremophiles. 13, 4, p. 735-46 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Vesicles in electric fields: some novel aspects of membrane behavior

    Dimova, R., Bezlyepkina, N. & Domange Jordö, M. E., 2009, In: Soft Matter. 5, 17, p. 3201-3212 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Viruses of the Archaea

    Basta, T., Garrett, Roger Antony & Prangishvili, D., 2009, Encyclopedia of Life Sciences. Wiley, p. 1-8

    Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research

  43. Published

    Where sociality and relatedness diverge: the genetic basis for hierarchical social organization in African elephants

    Wittemyer, G., Okello, J. B. A., Rasmussen, H. B., Arctander, P., Nyakaana, S., Douglas-Hamilton, I. & Siegismund, Hans Redlef, 2009, In: PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES B-CONTAINING PAPERS OF A BIOLOGICAL CHARACTER. 276, 1672, p. 3513-3521

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Seawater-regulated genes for two-component systems and outer membrane proteins in myxococcus

    Pan, H. W., Liu, H., Liu, T., Li, C. Y., Li, Z. F., Cai, K., Zhang, C. Y., ZHANG, YONG, Hu, W., Wu, Z. H. & Li, Y. Z., Apr 2009, In: Journal of Bacteriology. 191, 7, p. 2102-2111 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. 2010
  46. Published

    A long-standing Pleistocene refugium in southern Africa and a mosaic of refugia in East Africa: insights from mtDNA and the common eland antelope

    Lorenzen, Eline, Masembe, C., Arctander, P. & Siegismund, Hans Redlef, 2010, In: Journal of Biogeography. 37, 3, p. 571-581 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus

    Gresham, D., Usaite, R., Germann, S. M., Lisby, Michael, Botstein, D. & Regenberg, Birgitte, 2010, In: Proceedings of the National Academy of Science of the United States of America. 107, 43, p. 18551-6 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Gene expression analysis of the emergence of epileptiform activity after focal injection of kainic acid into mouse hippocampus

    Motti, D., Le Duigou, C., Eugène, E., Chemaly, N., Wittner, L., Lazarevic, D., Krmac, H., Marstrand, T., Valen, E., Sanges, R., Stupka, E., Sandelin, Albin Gustav, Cherubini, E., Gustincich, S. & Miles, R., 2010, In: European Journal of Neuroscience. 32, 8, p. 1364-79 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Gene expression profiles in rice roots under low phosphorus stress

    Li, L., Liu, C. & Lian, X., 2010, In: Plant Molecular Biology. 72, 4-5, p. 423-432 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV

    Goulet, A., Vestergaard, G. A., Felisberto-Rodrigues, C., Campanacci, V., Garrett, Roger Antony, Cambillau, C. & Ortiz-Lombardía, M., 2010, In: Acta Crystallographica. Section D: Biological Crystallography. 66, Pt 3, p. 304-308 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Insights into the structure, function and evolution of the radical-SAM 23S rRNA methyltransferase Cfr that confers antibiotic resistance in bacteria

    Kaminska, K. H., Purta, E., Hansen, L. H., Bujnicki, J. M., Vester, B. & Long, K. S., 2010, In: Nucleic Acids Research. 38, 5, p. 1652-1663 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Lazarus1, a DUF300 protein, contributes to programmed cell death associated with Arabidopsis acd11 and the hypersensitive response

    Malinovsky, F. G., Brodersen, P., Fiil, Berthe Katrine, McKinney, L. V., Thorgrimsen, S., Beck, M., Nielsen, H. B., Pietra, S., Zipfel, C., Robatzek, S., Petersen, Morten, Hofius, D. & Mundy, J., 2010, In: P L o S One. 5, 9, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

Previous 1...3 4 5 6 7 8 9 10 ...20 Next