- Published
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
Birney, E., Stamatoyannopoulos, J. A., Dutta, A., Guigó, R., Gingeras, T. R., Margulies, E. H., Weng, Z., Snyder, M., Dermitzakis, E. T., Thurman, R. E., Kuehn, M. S., Taylor, C. M., Neph, S., Koch, C. M., Asthana, S., Malhotra, A., Adzhubei, I., Greenbaum, J. A., Andrews, R. M., Flicek, P. & 36 others, , 2007, In: Nature. 447, 7146, p. 799-816 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural variations between small alarmone hydrolase dimers support different modes of regulation of the stringent response
Bisiak, F., Chrenková, A., Zhang, S., Pedersen, J. N., Otzen, D. E., ZHANG, YONG & Brodersen, D. E., 2022, In: Journal of Biological Chemistry. 298, 7, 16 p., 102142.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Viruses in acidic geothermal environments of the Kamchatka Peninsula
Bize, A., Peng, Xu, Prokofeva, M., Maclellan, K., Lucas, S., Forterre, P., Garrett, Roger Antony, Bonch-Osmolovskaya, E. A. & Prangishvili, D., 2008, In: Research in Microbiology. 159, 5, p. 358-66 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel type of silencing factor, Clr2, is necessary for transcriptional silencing at various chromosomal locations in the fission yeast Schizosaccharomyces pombe
Bjerling, P., Ekwall, K., Egel, Richard & Thon, Genevieve, 2004, In: Nucleic Acids Research. 32, 15, p. 4421-8 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Suppressors of Hyperinitiation in Escherichia coli Couple DNA Replication to Precursor Biosynthesis and Energy Metabolism
Bjørn, L., 2015, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Lack of the RNA chaperone Hfq attenuates pathogenicity of several Escherichia coli pathotypes towards Caenorhabditis elegans
Bojer, M. S., Jakobsen, H., Struve, C., Krogfelt, K. A. & Løbner-Olesen, Anders, 2012, In: Microbes and Infection. 14, 12, p. 1034-1039 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Unified Resource for Tracking Anti-CRISPR Names
Bondy-Denomy, J., Davidson, A. R., Doudna, J. A., Fineran, P. C., Maxwell, K. L., Moineau, S., Peng, Xu, Sontheimer, E. J. & Wiedenheft, B., 2018, In: CRISPR Journal. 1, 5, p. 304-305Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Control of specific gene expression by gibberellin and brassinosteroid
Bouquin, T., Meier, C., Foster, R., Nielsen, Mads Eggert & Mundy, J., 2001, In: Plant Physiology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Arabidopsis lue1 mutant defines a katanin p60 ortholog involved in hormonal control of microtubule orientation during cell growth.
Bouquin, T., Mattsson, O., Naested, H., Foster, R. & Mundy, J., 2003, In: Journal of Cell Science. 116, Pt 5, p. 791-801 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Unified Nomenclature for Protein Subunits of Mediator Complexes Linking Transcriptional Regulators to RNA Polymerase II
Bourbon, H. M., Aguilera, A., Ansari, A. Z., Asturias, F. J., Berk, A. J., Bjorklund, S., Blackwell, T. K., Borggrefe, T., Carey, M., Carlson, M., Conaway, J. W., Conaway, R. C., Emmons, S. W., Fondell, J. D., Freedman, L. P., Fukasawa, T., Gustafsson, C. M., Han, M., He, X., Herman, P. K. & 27 others, , 2004, In: Molecular Cell. 14, 5, p. 553-557Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial growth control studied by flow cytometry
Boye, E. & Løbner-Olesen, Anders, 1 Feb 1991, In: Research in Microbiology. 142, 2-3, p. 131-5 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Flow cytometry: illuminating microbiology
Boye, E. & Løbner-Olesen, Anders, Feb 1990, In: The New Biologist. 2, 2, p. 119-25 7 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Timing of chromosomal replication in Escherichia coli
Boye, E., Løbner-Olesen, Anders & Skarstad, K., 20 Dec 1988, In: B B A - Reviews on Cancer. 951, 2-3, p. 359-64 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of dam methyltransferase in the control of DNA replication in E. coli
Boye, E. & Løbner-Olesen, Anders, 7 Sep 1990, In: Cell. 62, 5, p. 981-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of DNA replication in Escherichia coli
Boye, E., Lyngstadaas, A., Løbner-Olesen, Anders, Skarstad, K. & Wold, S., 1992, 43 Colloquium Mosbach. Springer Verlag, p. 15-26Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Dam methyltransferase in Escherichia coli: Effects of different enzymatic levels on DNA replication and cell growth
Boye, E., Lyngstadaas, A. & Løbner-Olesen, Anders, 1992, DNA replication: The Regulatory Mechanisms. P., H., E., F. & M, K. (eds.). Springer Verlag, p. 23-35Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Identification of let-7-regulated oncofetal genes.
Boyerinas, B., Park, S., Shomron, N., Hedegaard, M. M., Vinther, Jeppe, Andersen, J. S., Feig, C., Xu, J., Burge, C. B. & Peter, M. E., 2008, In: Cancer Research. 68, 8, p. 2587-91 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ZGRF1 Helicase Promotes Recombinational Repair of Replication-Blocking DNA Damage in Human Cells
Brannvoll, A., Xue, X., Kwon, Y., Kompocholi, Smaragda, Simonsen, Anne Katrine Wrist, Bagge, Keerthana Stine Viswalingam, Gonzalez, L., Hickson, Ian David, Østergaard, Vibe Hallundbæk, Mankouri, H. W., Sung, P. & Lisby, Michael, 2020, In: Cell Reports. 32, 1, 25 p., 107849.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Constitutive SOCS-3 expression protects T-cell lymphoma against growth inhibition by IFNalpha
Brender, C., Lovato, P., Sommer, V. H., Woetmann, Anders , Mathiesen, A., Geisler, Carsten, Wasik, M. & Ødum, Niels, 2005, In: Leukemia. 19, 2, p. 209-13 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Immunity in the moss Physcomitrella patens
Bressendorff, Simon, 2012, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
An innate immunity pathway in the moss Physcomitrella patens
Bressendorff, Simon, Azevedo da Silva, R., Kenchappa, C. S., Ponce de León, I., Olsen, J. V., Rasmussen, M. W., Erbs, G., Newman, Mari-Anne, Petersen, Morten & Mundy, J., 2016, In: The Plant Cell. 28, 6, p. 1328-1342 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chitin-induced responses in the moss Physcomitrella patens
Bressendorff, Simon, Rasmussen, M. W., Petersen, Morten & Mundy, J., 2017, Plant pattern recognition receptors: methods and protocols. Shan, L. & He, P. (eds.). Springer, p. 317-324 8 p. (Methods in Molecular Biology, Vol. 1578).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Discrete structural dynamics of pseudo-palindromic motifs control DNA binding of bacterial toxin-antitoxin complexes
Brodersen, D. E., Bendtsen, K. L., Xu, K., Luckmann, M., Winther, K. S., Shah, S. A. & Pedersen, C. N. S., 2017, In: F A S E B Journal. 31, S1, 1 p., 777.2.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4
Brodersen, K. P., Petersen, Morten, Nielsen, H. B., Zhu, S., Newman, Mari-Anne, Shokat, K. M., Rietz, S., Parker, J. & Mundy, J., 2006, In: Plant Journal. 47, 4, p. 532-546 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of salicylic acid in the induction of cell death in Arabidopsis acd11
Brodersen, K. P., Malinovsky, F. G., Hématy, K., Newman, Mari-Anne & Mundy, J., 2005, In: Plant Physiology. 138, 2, p. 1037-1045 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Knockout of Arabidopsis accelerated-cell-death11 encoding a sphingosine transfer protein causes activation of programmed cell death and defense.
Brodersen, P., Petersen, Morten, Pike, H. M., Olszak, B., Skov, Søren, Odum, N., Jørgensen, L. B., Brown, R. E. & Mundy, J., 2002, In: Genes & Development. 16, 4, p. 490-502 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic selection and DNA sequences of 4.5S RNA homologs
Brown, Stanley, Thon, Genevieve & Tolentino, E., 1989, In: Journal of Bacteriology. 171, 12, p. 6517-20 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expanding the potential of NAI-107 for treating serious ESKAPE pathogens: synergistic combinations against Gram-negatives and bactericidal activity against non-dividing cells
Brunati, C., Thomsen, T. T., Gaspari, E., Maffioli, S., Sosio, M., Jabes, D., Løbner-Olesen, Anders & Donadio, S., 2018, In: The Journal of antimicrobial chemotherapy. 73, 2, p. 414-424 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Revised sequence of foxtail mosaic virus reveals a triple gene block structure similar to potato virus X
Bruun-Rasmussen, M., Madsen, C. T., Johansen, E. & Albrechtsen, M., 2008, In: Archives of Virology. 153, 1, p. 223-226Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability of Barley stripe mosaic virus-induced gene silencing in barley.
Bruun-Rasmussen, M., Madsen, C. T., Jessing, S. & Albrechtsen, M. T., 2007, In: Molecular Plant - Microbe Interactions. 20, 11, p. 1323-31 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update.
Bryne, J. C., Valen, E., Tang, M. E., Marstrand, T., Winther, Ole, da Piedade, I., Krogh, Anders, Lenhard, B. & Sandelin, Albin Gustav, 2008, In: Nucleic Acids Research. 36, Database issue, p. D102-6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C
Brügger, K., Chen, L., Stark, M., Zibat, A., Redder, P., Ruepp, A., Awayez, M., She, Q., Garrett, Roger Antony & Klenk, H., 2007, In: Archaea. 2, 2, p. 127-35 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sulfolobus genomes: mechanisms of rearrangement and change
Brügger, K., Peng, Xu & Garrett, Roger Antony, 2006, Archaea: Evolution, physiology and Molecular Biolog.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Correction: The PCNA interaction protein box sequence in Rad54 is an integral part of its ATPase domain and is required for efficient DNA repair and recombination (PLoS ONE (2013) 8, 12 (e82630) DOI: 10.1371/journal.pone.0082630)
Burgess, R. C., Sebesta, M., Sisakova, A., Marini, V. P. & Lisby, Michael, 24 Jun 2014, In: PLoS ONE. 9, 6, e101095.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Localization of recombination proteins and Srs2 reveals anti-recombinase function in vivo
Burgess, R. C., Lisby, Michael, Altmannova, V., Krejci, L., Sung, P. & Rothstein, R., 2009, In: Journal of Cell Biology. 185, 6, p. 969-81 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The PCNA interaction protein box sequence in Rad54 is an integral part of its ATPase domain and is required for efficient DNA repair and recombination
Burgess, R. C., Sebesta, M., Sisakova, A., Marini, V. P., Lisby, Michael, Damborsky, J., Klein, H., Rothstein, R. & Krejci, L., 2013, In: PLoS ONE. 8, 12, p. e82630 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination.
Burgess, R. C., Rahman, S., Lisby, Michael, Rothstein, R. & Zhao, X., 2007, In: Molecular and Cellular Biology. 27, 17, p. 6153-62 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics and stabilization of the human gut microbiome during the first year of life
Bäckhed, G. F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., Khan, M. T., Zhang, J., Li, J., Xiao, L., Al-Aama, J., Zhang, D., Lee, Y. S., Kotowska, D. E., Colding, C. S., Tremaroli, V. & 7 others, , 2015, In: Cell Host & Microbe. 17, 5, p. 690-703 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system
Bærentsen, R. L., Nielsen, S. V., Skjerning, R. B., Lyngsø, J., Bisiak, F., Pedersen, J. S., Gerdes, K., Sørensen, Michael Askvad & Brodersen, D. E., 2023, In: eLife. 12, 20 p., RP90400.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolution of the bacterial nucleosidase PpnN and its relation to the stringent response
Bærentsen, R. L., Brodersen, D. E. & ZHANG, YONG, 2019, In: Microbial Cell Factories. 6, 9, p. 450-453Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A High Resolution, High Throughput Approach for Subcellular Spatial Omics
CHEN, Ao, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
CRI-SPA: a high-throughput method for systematic genetic editing of yeast libraries
Cachera, P., Olsson, H., Coumou, H., Jensen, M. L., Sánchez, B., Strucko, T., Van den broek, M., Daran, J., Jensen, M., Sonnenschein, N., Lisby, Michael & Mortensen, U., 2023, In: Nucleic acids symposium series. 51, 17, 14 p., e91.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antisense inhibition of the Escherichia coli NrdAB aerobic ribonucleotide reductase is bactericidal due to induction of DNA strand breaks
Campion, C., Charbon, Godefroid, Thomsen, T. T., Nielsen, Peter E. & Løbner-Olesen, Anders, 2021, In: Journal of Antimicrobial Chemotherapy. 76, 11, p. 2802–2814 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Targeting synthesis of the Chromosome Replication Initiator Protein DnaA by antisense PNA-peptide conjugates in Escherichia coli
Campion, C., Charbon, Godefroid, Nielsen, Peter E. & Løbner-Olesen, Anders, 2024, In: Frontiers in Antibiotics. 3, 10 p., 1384390.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
PICH deficiency limits the progression of MYC-induced B-cell lymphoma
Castejón-Griñán, M., Albers, E., Simón-Carrasco, L., Aguilera, P., Sbroggio, M., Pladevall Morera, David, Ingham, Andreas, Lim, Ernest Wee Kiat, Guillen-Benitez, A., Pietrini, E., Lisby, Michael, Hickson, Ian David & Lopez-Contreras, Andres, 2024, In: Blood Cancer Journal. 14, 1, 15 p., 16.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic context drives transcription of insertion sequences in the bacterial endosymbiont Wolbachia wVulC
Cerveau, N., Gilbert, C., Liu, C., Garrett, Roger Antony, Greve, P., Bouchon, D. & Cordaux, R., 2015, In: Gene. 564, 1, p. 81-86 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of telomere metabolism by the RNA processing protein Xrn1
Cesena, D., Cassani, C., Rizzo, E., Lisby, Michael, Bonetti, D. & Longhese, M. P., 20 Apr 2017, In: Nucleic Acids Research. 45, 7, p. 3860-3874 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Iron chelation increases the tolerance of Escherichia coli to hyper-replication stress
Charbon, Godefroid, Klitgaard, R. N., Liboriussen, C. D., Thulstrup, Peter Waaben, Maffioli, S. I., Donadio, S. & Løbner-Olesen, Anders, 2018, In: Scientific Reports. 8, 1, 14 p., 10550.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Re-wiring of energy metabolism promotes viability during hyperreplication stress in E. coli
Charbon, Godefroid, Campion, C., Chan, S. H. J., Bjørn, L., Weimann, A., da Silva, L. C. N., Jensen, P. R. & Løbner-Olesen, Anders, 27 Jan 2017, In: PLoS Genetics. 13, 1, 26 p., e1006590.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Counting Replication Origins to Measure Growth of Pathogens
Charbon, Godefroid, Haugan, M. S., Frimodt-Møller, N. & Løbner-Olesen, Anders, 2020, In: Antibiotics. 9, 5, 5 p., 239.Research output: Contribution to journal › Journal article › Research › peer-review
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Receptor-like kinase complexes in plant innate immunity
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MAP kinase cascades in Arabidopsis innate immunity
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relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data
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Bacterial chromosomes and their replication
Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
PICH deficiency limits the progression of MYC-induced B-cell lymphoma
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Going through changes - the role of autophagy during reprogramming and differentiation
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