Functional Genomics

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  1. 2002
  2. Published

    The fission yeast ubiquitin-conjugating enzymes UbcP3, Ubc15, and Rhp6 affect transcriptional silencing of the mating-type region

    Nielsen, I. S., Nielsen, Olaf, Murray, J. M. & Thon, Genevieve, 1 Aug 2002, In: Eukaryotic Cell (Online Edition). 1, 4, p. 613-25 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    An Arabidopsis callose synthase.

    Ostergaard, L., Petersen, Morten, Mattsson, O. & Mundy, J., 2002, In: Plant Molecular Biology. 49, 6, p. 559-566 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    An exceptional case of historical outbreeding in African sable antelope populations

    Pitra, C., Hansen, Anders Johannes, Lieckfeldt, D. & Arctander, P., 2002, In: Molecular Ecology. 11, 7, p. 1197-208

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Cloning-free genome alterations in Saccharomyces cerevisiae using adaptamer-mediated PCR

    Reid, R. J. D., Lisby, Michael & Rothstein, R., 2002, In: Methods in Enzymology. 350, p. 258-77 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Knockout of Arabidopsis accelerated-cell-death11 encoding a sphingosine transfer protein causes activation of programmed cell death and defense.

    Brodersen, P., Petersen, Morten, Pike, H. M., Olszak, B., Skov, Søren, Odum, N., Jørgensen, L. B., Brown, R. E. & Mundy, J., 2002, In: Genes & Development. 16, 4, p. 490-502 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    MAP-kinaser--molekylaere transistorer i dyr og planter.

    Petersen, Morten, Brodersen, P. & Mundy, J., 2002, In: Ugeskrift for læger. 164, 24, p. 3184-8 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Population structure of the African savannah elephant inferred from mitochondrial control region sequences and nuclear microsatellite loci

    Nyakaana, S., Arctander, P. & Siegismund, Hans Redlef, 2002, In: Heredity. 89, 2, p. 90-8 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Protein phosphatase 2A (PP2A) regulates interleukin-4-mediated STAT6 signaling

    Woetmann, Anders , Brockdorff, J., Lovato, P., Nielsen, M., Leick, V., Rieneck, K., Svejgaard, A., Geisler, Carsten & Ødum, Niels, 2002, In: Journal of Biological Chemistry. 278, 5, p. 2787-91 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    SHP2 regulates IL-2 induced MAPK activation, but not Stat3 or Stat5 tyrosine phosphorylation, in cutaneous T cell lymphoma cells

    Lundin Brockdorff, J., Woetmann, Anders , Mustelin, T., Kaltoft, K., Zhang, Q., Wasik, M. A., Röpke, C. & Ødum, Niels, 2002, In: Cytokine. 20, 4, p. 141-7 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. 2001
  12. Published

    7. Proprioceptive evoked potentials (PEP) in man: Cerebral responses of changing weight loads on the hand

    Arnfred, Sidse Marie , CHEN, Ao, Eder, D. N., Glenthøj, Birte Yding & Hemmingsen, Ralf Peter, Oct 2001, In: Brain and Cognition. 47, 1-2, p. 54-57 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Rad52 forms DNA repair and recombination centers during S phase

    Lisby, Michael, Rothstein, R. & Mortensen, U. H., 17 Jul 2001, In: Proceedings of the National Academy of Sciences of the United States of America. 98, 15, p. 8276-8282 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Residues Within the N-terminal Domain of Human Topoisomerase I Play a Direct Role in Relaxation

    Lisby, Michael, Olesen, J. R., Skouboe, C., Krogh, B. O., Straub, T., Boege, F., Velmurugan, S., Martensen, P. M., Andersen, A. H., Jayaram, M., Westergaard, O. & Knudsen, B. R., 8 Jun 2001, In: Journal of Biological Chemistry. 276, 23, p. 20220-20227 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Inhibition of Flp Recombinase by the Topoisomerase I-targeting Drugs, Camptothecin and NSC-314622

    From Frøhlich, R., Hansen, S. G., Lisby, Michael, Grainge, I., Westergaard, O., Jayaram, M. & Knudsen, B. R., 9 Mar 2001, In: Journal of Biological Chemistry. 276, 10, p. 6993-6997 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Analysis of Schizosaccharomyces pombe mediator reveals a set of essential subunits conserved between yeast and metazoan cells

    Spåhr, H., Samuelsen, C. O., Baraznenok, V., Ernest, I., Huylebroeck, D., Remacle, J. E., Samuelsson, T., Kieselbach, T., Holmberg, Steen & Gustafsson, C. M., 2001, In: Proceedings of the National Academy of Science of the United States of America. 98, 21, p. 11985-11990 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Control of specific gene expression by gibberellin and brassinosteroid

    Bouquin, T., Meier, C., Foster, R., Nielsen, Mads Eggert & Mundy, J., 2001, In: Plant Physiology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Gibberellin response mutants identified by luciferase imaging

    Meier, C., Bouquin, T., Nielsen, Mads Eggert, Raventos, D., Mattsson, O., Rocher, A., Schomburg, F., Amasino, R. & Mundy, J., 2001, In: Plant Journal.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Neither Reb1p nor poly(dA*T) elements are responsible for the highly specific chromatin organization at the ILV1 promoter

    Moreira, José, Hörz, W. & Holmberg, Steen, 2001, In: Journal of Biological Chemistry. 277, 5, p. 3202-9 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Origins of the many NPY-family receptors in mammals

    Larhammar, D., Wraith, A., Berglund, M. M., Holmberg, Steen & Lundell, I., 2001, In: Peptides. 22, 3, p. 295-307 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Statistical evidence for miscoding lesions in ancient DNA templates

    Hansen, Anders Johannes, Willerslev, Eske, Wiuf, C., Mourier, T. & Arctander, P., 2001, In: Molecular Biology and Evolution. 18, 2, p. 262-65 4 p.

    Research output: Contribution to journal › Letter › Research

  22. Published

    Two differentially regulated Arabidopsis genes define a new branch of the DFR superfamily.

    Østergaard, L., Lauvergeat, V., Naested, H., Mattsson, O. & Mundy, J., 2001, In: Plant Science. 160, 3, p. 463-472 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. 2000
  24. Published

    Sequence-specific high mobility group box factors recognize 10-12-base pair minor groove motifs

    van Beest, M., Dooijes, D., van De Wetering, M., Kjaerulff, S., Bonvin, A., Nielsen, O., Clevers, H. & Nielsen, Olaf, 1 Sep 2000, In: Journal of Biological Chemistry. 275, 35, p. 27266-73 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Arabidopsis ATP A2 peroxidase. Expression and high-resolution structure of a plant peroxidase with implications for lignification.

    Petersen, Morten, Sep 2000, In: Plant Molecular Biology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Frequent disruption of the RB1 pathway in diffuse large B cell lymphoma: prognostic significance of E2F-1 and p16INK4A

    Møller, M. B., Kania, Per, Ino, Y., Gerdes, Anne-Marie Axø, Nielsen, Olaf, Louis, D. N., Skjødt, K. & Pedersen, N. T., May 2000, In: Leukemia. 14, 5, p. 898-904 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Mik1 levels accumulate in S phase and may mediate an intrinsic link between S phase and mitosis

    Christensen, P. U., Bentley, N. J., Martinho, R. G., Nielsen, O., Carr, A. & Nielsen, Olaf, 14 Mar 2000, In: Proceedings of the National Academy of Sciences of the United States of America. 97, 6, p. 2579-84 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Arabidopsis MAP Kinase 4 Negatively Regulates Systemic Acquired Resistance

    Petersen, Morten, Brodersen, P., Naested, H., Andreasson, E., Lindhart, U., Johansen, B., Nielsen, H. B., Lacy, M., Austin, M. J., Parker, J. E., Sharma, S. B., Klessig, D. F., Martienssen, R., Mattsson, O., Jensen, A. B. & Mundy, J. W., 2000, In: Gekkan Saibo. 103, 7, p. 1111-1120

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Arabidopsis ATP A2 peroxidase. Expression and high-resolution structure of a plant peroxidase with implications for lignification.

    Ostergaard, L., Teilum, Kaare, Mirza, Osman Asghar, Mattsson, O., Petersen, M., Welinder, K. G., Mundy, J., Gajhede, Michael & Henriksen, A., 2000, In: Plant Molecular Biology. 44, 2, p. 231-43 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. 1999
  31. Published

    Substrate specificity and gene expression of the amino acid permeases in Saccharomyces cerevisiae

    Regenberg, Birgitte, Düring-Olsen, L., Kielland-Brandt, M. C. & Holmberg, Steen, 1 Jan 1999, In: Current Genetics. 36, 6, p. 317-328 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Diversity of Holocene life forms in fossil glacier ice

    Willerslev, Eske, Hansen, Anders Johannes, Christensen, B., Steffensen, Jørgen Peder & Arctander, P., 1999, In: Proceedings of the National Academy of Science of the United States of America. 96, 14, p. 8017-21

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Inhibition of constitutively activated Stat3 correlates with altered Bcl-2/Bax expression and induction of apoptosis in mycosis fungoides tumor cells

    Nielsen, M., Kaestel, C. G., Eriksen, K. W., Woetmann, Anders , Stokkedal, T., Kaltoft, K., Geisler, Carsten, Röpke, C. & Odum, N., 1999, In: Leukemia. 13, 5, p. 735-8 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Inhibition of protein phosphatase 2A induces serine/threonine phosphorylation, subcellular redistribution, and functional inhibition of STAT3

    Woetmann, Anders , Nielsen, M., Christensen, S. T., Brockdorff, J., Kaltoft, K., Engel, A. M., Skov, S., Brender, C., Geisler, Carsten, Svejgaard, A., Rygaard, J., Leick, V. & Odum, N., 1999, In: Proceedings of the National Academy of Science of the United States of America. 96, 19, p. 10620-5 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Mutations that cause threonine sensitivity identify catalytic and regulatory regions of the aspartate kinase of Saccharomyces cerevisiae

    Arévalo-Rodríguez, M., Calderón, I. L. & Holmberg, Steen, 1999, In: Yeast. 15, 13, p. 1331-45 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Overexpression of putative NADH oxidases from the hyperthermophilic archaeons Sulfolobus solfataricus and Pyrococcus horikoshii

    Crane III, E. J., Ward, D. E., van der Oost, J., She, Q. & Garrett, Roger Antony, 1999, Flavins and Flavoproteins 1999 (Ghisla, S., Kroneck, P., Macheroux, P., and Sund, H. ed.). Berlin, p. 281-284 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  37. Published

    The antibiotic micrococcin acts on protein L11 at the ribosomal GTPase centre.

    Porse, Bo Torben, Cundliffe, E. & Garrett, Roger Antony, 1999, In: Journal of Molecular Biology. 287, 1, p. 33-45 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC

    Moreira, José & Holmberg, Steen, 1999, In: E M B O Journal. 18, 10, p. 2836-44 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Yeast transcriptional regulator Leu3p: Self-masking, specificity of masking, and evidence for regulation by the intracellular level of Leu3p

    Wang, D., Zheng, F., Holmberg, Steen & Kohlhaw, G. B., 1999, In: The Journal of Biological Chemistry. 274 (27), p. 19017-19024

    Research output: Contribution to journal › Journal article › Research

  40. 1998
  41. Published

    The RNA-splicing factor PSF/p54(nrb) controls DNA-topoisomerase I activity by a direct interaction

    Straub, T., Grue, P., Uhse, A., Lisby, Michael, Knudsen, B. R., Tange, T., Westergaard, O. & Boege, F., 9 Oct 1998, In: Journal of Biological Chemistry. 273, 41, p. 26261-26264 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Alcoholysis and strand joining by the Flp site-specific recombinase: Mechanistically equivalent reactions mediated by distinct catalytic configurations

    Knudsen, B. R., Lee, J., Lisby, Michael, Westergaard, O. & Jayaram, M., 21 Aug 1998, In: Journal of Biological Chemistry. 273, 34, p. 22028-22036 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    FH3, a domain found in formins, targets the fission yeast formin Fus1 to the projection tip during conjugation

    Petersen, J., Nielsen, O., Egel, Richard, Hagan, I. M. & Nielsen, Olaf, 1 Jun 1998, In: Journal of Cell Biology. 141, 5, p. 1217-28 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    F-actin distribution and function during sexual differentiation in Schizosaccharomyces pombe

    Petersen, J., Nielsen, O., Egel, Richard, Hagan, I. M. & Nielsen, Olaf, 1 Apr 1998, In: Journal of Cell Science. 111 ( Pt 7), p. 867-76 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    A novel esterase from Saccharomyces carlsbergensis, a possible function for the yeast TIP1 gene

    Horsted, M. W., Dey, E. S., Holmberg, Steen & Kielland-Brandt, M. C., 1998, In: Yeast. 14, 9, p. 793-803 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p

    Moreira, José, Remacle, J. E., Kielland-Brandt, M. & Holmberg, Steen, 1998, In: Molecular and General Genetics. 258, 1-2, p. 95-103 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Nucleosome structure of the yeast CHA1 promoter: analysis of activation-dependent chromatin remodeling of an RNA-polymerase-II-transcribed gene in TBP and RNA pol II mutants defective in vivo in response to acidic activators

    Moreira, José & Holmberg, Steen, 1998, In: E M B O Journal. 17, 20, p. 6028-38 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Population structure of African buffalo inferred from mtDNA sequences and microsatellite loci: high variation but low differentiation

    Simonsen, Bo Thisted, Siegismund, Hans Redlef & Arctander, P., 1998, In: Molecular Ecology. 7, 2, p. 225-37 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    The role of caspase 3 and BclxL in the action of interleukin 7 (IL-7): a survival factor in activated human T cells

    Amos, C. L., Woetmann, Anders , Nielsen, M., Geisler, Carsten, Odum, N., Brown, B. L. & Dobson, P. R., 1998, In: Cytokine. 10, 9, p. 662-8 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. 1997
  51. Published

    Cell differentiation by interaction of two HMG-box proteins: Mat1-Mc activates M cell-specific genes in S.pombe by recruiting the ubiquitous transcription factor Ste11 to weak binding sites

    Kjaerulff, S., Dooijes, D., Clevers, H., Nielsen, O. & Nielsen, Olaf, 1 Jul 1997, In: E M B O Journal. 16, 13, p. 4021-33 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    The Schizosaccharomyces pombe mam1 gene encodes an ABC transporter mediating secretion of M-factor

    Christensen, P. U., Davey, W. J., Nielsen, O. & Nielsen, Olaf, 1 Jun 1997, In: Molecular and General Genetics MGG. 255, 2, p. 226-36 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Identification of the transporter for the M-factor mating pheromone in fission yeast

    Davey, W. J., Christensen, P. U., Nielsen, O. & Nielsen, Olaf, 1 May 1997, In: Biochemical Society Transactions. 25, 2, p. 224S

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Abc1: a new ABC transporter from the fission yeast Schizosaccharomyces pombe

    Christensen, P. U., Davis, K., Nielsen, O., Davey, W. J. & Nielsen, Olaf, 1 Feb 1997, In: F E M S Microbiology Letters. 147, 1, p. 97-102 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Organization and expression of genes in the genomic region surrounding the glutamine synthetase gene Gln1 from Lotus japonicus

    Thykjaer, T., Danielsen, D., She, Q. & Stougaard, J., 1997, In: Molecular Genetics and Genomics. 255, 6, p. 628-36 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. 1996
  57. Published

    The Schizosaccharomyces pombe map1 gene encodes an SRF/MCM1-related protein required for P-cell specific gene expression

    Nielsen, O., Friis, T., Kjaerulff, S. & Nielsen, Olaf, 13 Dec 1996, In: Molecular and General Genetics MGG. 253, 3, p. 387-92 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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