Mathias Middelboe
Professor
Marine Biology
Strandpromenaden 5
3000 Helsingør
- Published
Virus and bacteria dynamics of a coastal sediment: Implication for benthic carbon cycling.
Glud, R. N. & Middelboe, Mathias, 2004, In: Limnology and Oceanography. 49(6), p. 2073-2081Research output: Contribution to journal › Journal article › Research › peer-review
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Havbunden - et levested for vigtige aktører i havets husholdning
Glud, R. N. & Middelboe, Mathias, 2006, In: Naturens Verden. 11/12, p. 2-9Research output: Contribution to journal › Journal article › Research
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Distribution of oxygen in surface sediments from central Sagami Bay, Japan: In situ measurements by microelectrodes and planar optodes
Glud, R. N., Wenzhöfer, F., Tengberg, A., Middelboe, Mathias, Oguri, K. & Kitazato, H., 2005, In: Deep Sea Research - Part I - Oceanographic Research Papers. Part I (52), p. 1974-1987Research output: Contribution to journal › Journal article › Research › peer-review
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Viral abundance and genome size distribution in the sediment and water column of marine and freshwater ecosystems
Filippini, M. & Middelboe, Mathias, 2007, In: FEMS Microbiology Ecology. 60, p. 397-410Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic Analysis of Pasteurella atlantica Provides Insight on Its Virulence Factors and Phylogeny and Highlights the Potential of Reverse Vaccinology in Aquaculture
Ellul, R. M., Kalatzis, Panagiotis, Frantzen, C., Haugland, G. T., Gulla, S., Colquhoun, D. J., Middelboe, Mathias, Wergeland, H. I. & Rønneseth, A., 2021, In: Microorganisms. 9, 6, 22 p., 1215.Research output: Contribution to journal › Journal article › Research › peer-review
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Ny viden om virus' betydning for Jordens kulstofomsætning.
Drejet, L. & Middelboe, Mathias, 2007, In: Dansk Kemi. 88, 2, p. 11-13Research output: Contribution to journal › Journal article › Communication
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Phage-Mediated Control of Flavobacterium psychrophilum in Aquaculture: In vivo Experiments to Compare Delivery Methods
Donati, V. L., Dalsgaard, I., Sundell, K., Castillo, D., Er-Rafik, M., Clark, J., Wiklund, T., Middelboe, Mathias & Madsen, L., 2021, In: Frontiers in Microbiology. 12, 16 p., 628309.Research output: Contribution to journal › Journal article › Research › peer-review
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The Gut Microbiota of Healthy and Flavobacterium psychrophilum-Infected Rainbow Trout Fry Is Shaped by Antibiotics and Phage Therapies
Donati, V. L., Madsen, L., Middelboe, Mathias, Strube, M. L. & Dalsgaard, I., 2022, In: Frontiers in Microbiology. 13, 21 p., 771296.Research output: Contribution to journal › Journal article › Research › peer-review
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Interactions between Rainbow Trout Eyed Eggs and Flavobacterium spp. Using a Bath Challenge Model: Preliminary Evaluation of Bacteriophages as Pathogen Control Agents
Donati, V. L., Dalsgaard, I., Runtuvuori-Salmela, A., Kunttu, H., Jørgensen, J., Castillo, D., Sundberg, L., Middelboe, Mathias & Madsen, L., 2021, In: Microorganisms. 9, 5, 31 p., 971.Research output: Contribution to journal › Journal article › Research › peer-review
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Separation of free virus from sediments in aquatic systems
Danovaro, R. & Middelboe, Mathias, 2010, Manual of Aquatic Viral Ecology. Wilhelm, S. W., Weinbauer, M. G. & Suttle, C. A. (eds.). ASLO, p. 74-81 8 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Detection and quantification of Flavobacterium psychrophilum-specific bacteriophages In Vivo in rainbow trout upon oral administration: implications for disease control in aquaculture
Christiansen, R. H., Dalsgaard, I., Middelboe, Mathias, Lauritsen, A. H. & Madsen, L., 2014, In: Applied and Environmental Microbiology. 80, 24, p. 7683-7693 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Effect of bacteriophages on the growth of Favobacterium psychrophilum and development of phage-resistant strains
Christiansen, R. H., Madsen, L., Dalsgaard, I., Castillo Bermúdez, D. E., Kalatzis, P. G. & Middelboe, Mathias, 2016, In: Microbial Ecology. 71, 4, p. 845-859 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Primer Registro de Abundancia Viral en Bahia Coliumo y Plataforma Continental Frente a Chile Central: First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile.
Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131Research output: Contribution to journal › Journal article › Research › peer-review
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First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile
Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131Research output: Contribution to journal › Journal article › Research › peer-review
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Bacteriophage resistance mechanisms in the fish pathogen Flavobacterium psychrophilum: linking genomic mutations to changes in bacterial virulence factors
Castillo Bermúdez, D. E., Cristiansen, R. H., Dalsgaard, I., Madsen, L. & Middelboe, Mathias, 2015, In: Applied and Environmental Microbiology. 81, 3, p. 1157-1167 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome sequences of the fish pathogen Vibrio harveyi strains VH2 and VH5
Castillo Bermúdez, D. E., D'Alvise, P., Middelboe, Mathias, Gram, L., Liu, S., Kalatzis, Panagiotis, Kokkari, C. & Katharios, P., 2015, In: Genome Announcements. 3, 5, 2 p., e01062-15.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic structure of bacteriophage 6H and its distribution as prophage in Flavobacterium psychrophilum strains
Castillo Bermúdez, D. E., Espejo, R. & Middelboe, Mathias, 2014, In: FEMS Microbiology Letters. 351, 1, p. 51-58 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Diversity and geographical distribution of Flavobacterium psychrophilum isolates and their phages: patterns of susceptibility to phage infection and phage host range
Castillo Bermúdez, D. E., Christiansen, R. H., Espejo, R. & Middelboe, Mathias, 2014, In: Microbial Ecology. 67, 4, p. 748-757 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome sequences of Vibrio alginolyticus strains V1 and V2, opportunistic marine pathogens
Castillo Bermúdez, D. E., D'Alvise, P., Kalatzis, Panagiotis, Kokkari, C., Middelboe, Mathias, Gram, L., Liu, S. & Katharios, P., 2015, In: Genome Announcements. 3, 4, 2 p., e00729-15.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome sequence of Vibrio parahaemolyticus VH3, isolated from an Aquaculture environment in Greece
Castillo Bermúdez, D. E., Jun, J. W., D'Alvise, P., Middelboe, Mathias, Gram, L., Liu, S. & Katharios, P., 2015, In: Genome Announcements. 3, 4, 2 p., e00731-15.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative genome analyses of Vibrio anguillarum strains reveal a link with pathogenicity traits
Castillo Bermúdez, D. E., Alvise, P. D., Xu, R., Zhang, F., Middelboe, Mathias & Gram, L., 28 Feb 2017, In: mSystems. 2, 1, 14 p., e00001-17.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic diversity of bacteriophages infecting the fish pathogen Flavobacterium psychrophilum
Castillo Bermúdez, D. E. & Middelboe, Mathias, 2016, In: F E M S Microbiology Letters. 363, 24, 6 p., fnw272.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative genome analysis provides Insights into the pathogenicity of Flavobacterium psychrophilum
Castillo Bermúdez, D. E., Christiansen, R. H., Dalsgaard, I., Madsen, L., Espejo, R. & Middelboe, Mathias, 2016, In: P L o S One. 11, 4, 18 p., e0152515.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative Genomic Analyses of Flavobacterium psychrophilum Isolates Reveals New Putative Genetic Determinants of Virulence Traits
Castillo, D., Donati, V. L., Jørgensen, J., Sundell, K., Dalsgaard, I., Madsen, L., Wiklund, T. & Middelboe, Mathias, 2021, In: Microorganisms. 9, 8, 15 p., 1658.Research output: Contribution to journal › Journal article › Research › peer-review
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Widespread distribution of prophage-encoded virulence factors in marine Vibrio communities
Castillo, D., Kauffman, K., Hussain, F., Kalatzis, Panagiotis, Rørbo, N., Polz, M. F. & Middelboe, Mathias, 2018, In: Scientific Reports. 8, p. 1-9 9973.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft Genome Sequences of Six Vibrio diazotrophicus Strains Isolated from Deep Subsurface Sediments of the Baltic Sea
Castillo, D., Vandieken, V., Engelen, B., Engelhardt, T. & Middelboe, Mathias, 2018, In: Genome Announcements. 6, 10, p. 1-2 e00081-18.Research output: Contribution to journal › Journal article › Research › peer-review
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Phage defense mechanisms and their genomic and phenotypic implications in the fish pathogen Vibrio anguillarum
Castillo, D., Rørbo, N., Jørgensen, J., Lange, J., Tan, D., Kalatzis, Panagiotis, Svenningsen, Sine Lo & Middelboe, Mathias, 2019, In: FEMS Microbiology Ecology. 95, 3, fiz004.Research output: Contribution to journal › Journal article › Research › peer-review
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Large Phenotypic and Genetic Diversity of Prophages Induced from the Fish Pathogen Vibrio anguillarum
Castillo, D., Andersen, N., Kalatzis, Panagiotis & Middelboe, Mathias, 2019, In: Viruses. 11, 11, 15 p., 983.Research output: Contribution to journal › Journal article › Research › peer-review
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In Vitro Evolution of Specific Phages Infecting the Fish Pathogen Flavobacterium psychrophilum
Castillo, D., Højsting, A. R., Roosvall, A., Smyrlis, G., Jørgensen, J. & Middelboe, Mathias, 2022, In: PHAGE: Therapy, Applications, and Research. 3, 1, p. 28-37 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genome-informed approach to identify genetic determinants of Flavobacterium psychrophilum phage susceptibility
Castillo, D., Jørgensen, J., Sundell, K., Madsen, L., Dalsgaard, I., Wiklund, T. & Middelboe, Mathias, 2021, In: Environmental Microbiology. 23, 8, p. 4185-4199 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Diversity of Flavobacterium psychrophilum and the potential use of its phages for protection against bacterial cold water disease in salmonids
Castillo, D., Higuera, G., Villa, M., Middelboe, Mathias, Dalsgaard, I., Madsen, L. & Espejo, R. T., 2012, In: Journal of Fish Diseases Online. 35, 3, p. 193-201 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Autofluorescence imaging system to discriminate and quantify the distribution of benthic cyanobacteria and diatoms
Carreira, C., Staal, M. J., Middelboe, Mathias & Brussaard, C. P. D., 2015, In: Limnology and Oceanography: Methods. 13, 4, p. 169-177 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Heterogeneous distribution of prokaryotes and viruses at the microscale in a tidal sediment
Carreira, C., Larsen, M., Glud, R. N., Brussaard, C. P. D. & Middelboe, Mathias, 2013, In: Aquatic Microbial Ecology. 69, 3, p. 183-192 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microscale spatial distributions of microbes and viruses in intertidal photosynthetic microbial mats
Carreira, C., Piel, T., Staal, M. J., Stuut, J. W., Middelboe, Mathias & Brussaard, C. P. D., 2015, In: SpringerPlus. 4, 11 p., 239.Research output: Contribution to journal › Journal article › Research › peer-review
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Disruption of photoautotrophic intertidal mats by filamentous fungi
Carreira, C., Staal, M. J., Falkoski, D., de Vries, R. P., Middelboe, Mathias & Brussaard, C. P. D., 2015, In: Environmental Microbiology. 17, 8, p. 2910-2921 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Counting viruses and bacteria in photosynthetic microbial mats
Carreira, C., Staal, M. J., Middelboe, Mathias & Brussaard, C. P. D., 2015, In: Applied and Environmental Microbiology. 81, 6, p. 2149-2155 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Global-scale processes with a nanoscale drive - the role of marine viruses
Brussard, C. P. D., Wilhelm, S. W., Thinhstad, T. F., Weinbauer, T. F., Bratbak, M. G., Heldal, M., Kimmance, S. A., Middelboe, Mathias, Nagasaki, K., Paul, J. H., Schroeder, D. C., Suttle, C. A., Vaque, D. & Wommack, K. E., 2008, In: ISME Journal. 2, p. 575-578Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Marine Viruses: Community Dynamics, Diversity and Impact on Microbial Processes
Breitbart, M., Middelboe, Mathias & Rohwer, F., 2008, Microbial Ecology of the Oceans. Second Edition ed. IEEE Computer Society Press, p. 443-479Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
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Influence of bacterial uptake on deep-ocean dissolved organic carbon
Bendtsen, J., Lundsgaard, C., Middelboe, Mathias & Archer, D., 2002, In: Global Biogeochemical Cycles. vol. 16(0), p. 1-13Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sharp contrasts between freshwater and marine microbial enzymatic capabilities, community composition, and DOM pools in a NE Greenland fjord
Balmonte, J. P., Hasler-Sheetal, H., Glud, R. N., Andersen, Thorbjørn Joest, Sejr, M. K., Middelboe, Mathias, Teske, A. & Arnosti, C., 2020, In: Limnology and Oceanography. 65, 1, p. 77-95 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 8392
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Viral lysis of bacteria: an important source of dissolved amino acids and cell wall compounds
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Seasonal dynamics of autotrophic and heterotrophic plankton metabolism and PCO2 in a subarctic Greenland fjord
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Virus-driven nitrogen cycling enhances phytoplankton growth
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