Mathias Middelboe

Mathias Middelboe

Professor


  1. Published

    Dynamics of Baltic Sea phages driven by environmental changes

    Hoetzinger, M., Nilsson, E., Arabi, R., Osbeck, C. M. G., Pontiller, B., Hutinet, G., Bayfield, O. W., Traving, S., Kisand, V., Lundin, D., Pinhassi, J., Middelboe, Mathias & Holmfeldt, K., 2021, In: Environmental Microbiology. 23, 8, p. 4576-4594 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Effect of bacteriophages on the growth of Favobacterium psychrophilum and development of phage-resistant strains

    Christiansen, R. H., Madsen, L., Dalsgaard, I., Castillo Bermúdez, D. E., Kalatzis, P. G. & Middelboe, Mathias, 2016, In: Microbial Ecology. 71, 4, p. 845-859 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Effects of Bacteriophages on the Population Dynamics of Four Strains of Pelagic Marine Bacteria

    Middelboe, Mathias, Hagström, Å., Blackburn, N., Sinn, B., Fischer, U., Borch, N. H., Pinhassi, J., Simu, K. & Lorenz, M. G., 2001, In: Microbial Ecology. 42, p. 395-406

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Effects of allochthonous dissolved organic matter input on microbial composition and nitrogen-cycling genes at two contrasting estuarine sites

    Happel, E. M., Markussen, T. M., Teikari, J. E., Huchaiah, V., Alneberg, J., Andersson, A. F., Sivonen, K., Middelboe, Mathias, Kisand, V. & Riemann, Lasse, 2019, In: F E M S Microbiology Ecology. 95, 9, 10 p., fiz123.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Effects of viral enrichment on the mortality and growth of heterotrophic bacterioplankton

    Noble, R. T., Middelboe, Mathias & Fuhrman, J. A., 1999, In: Aquatic Microbial Ecology. 18, p. 1-13

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Effects of viruses on nutrient turnover and growth efficiency of noninfected marine bacterioplankton

    Middelboe, Mathias, Jørgensen, Niels O. G. & Kroer, Niels, 1996, In: Applied and Environmental Microbiology. 62, 6, p. 1991-1997 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Exploring the Effect of Phage Therapy in Preventing Vibrio anguillarum Infections in Cod and Turbot Larvae

    Rørbo, N. I., Rønneseth, A., Kalatzis, Panagiotis, Rasmussen, B. B., Engell-Sørensen, K., Kleppen, H. P., Wergeland, H. I., Gram, L. & Middelboe, Mathias, 2018, In: Antibiotics. 7, 2, 15 p., 42.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile

    Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Genome-informed approach to identify genetic determinants of Flavobacterium psychrophilum phage susceptibility

    Castillo, D., Jørgensen, J., Sundell, K., Madsen, L., Dalsgaard, I., Wiklund, T. & Middelboe, Mathias, 2021, In: Environmental Microbiology. 23, 8, p. 4185-4199 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Genomic Analysis of Pasteurella atlantica Provides Insight on Its Virulence Factors and Phylogeny and Highlights the Potential of Reverse Vaccinology in Aquaculture

    Ellul, R. M., Kalatzis, Panagiotis, Frantzen, C., Haugland, G. T., Gulla, S., Colquhoun, D. J., Middelboe, Mathias, Wergeland, H. I. & Rønneseth, A., 2021, In: Microorganisms. 9, 6, 22 p., 1215.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Genomic diversity of bacteriophages infecting the fish pathogen Flavobacterium psychrophilum

    Castillo Bermúdez, D. E. & Middelboe, Mathias, 2016, In: F E M S Microbiology Letters. 363, 24, 6 p., fnw272.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Genomic structure of bacteriophage 6H and its distribution as prophage in Flavobacterium psychrophilum strains

    Castillo Bermúdez, D. E., Espejo, R. & Middelboe, Mathias, 2014, In: FEMS Microbiology Letters. 351, 1, p. 51-58 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Global occurrence and heterogeneity of the Roseobacter-clade species Ruegeria mobilis

    Sonnenschein, E. C., Nielsen, K. F., D'Alvise, P., Porsby, C. H., Melchiorsen, J., Heilmann, J., Kalatzis, Panagiotis, López-Pérez, M., Bunk, B., Spröer, C., Middelboe, Mathias & Gram, L., 2017, In: The ISME Journal. 11, p. 569-583 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Global trends in the fluorescence characteristics and distribution of marine dissolved organic matter

    Jørgensen, L., Stedmon, C., Kragh, T., Markager, S., Middelboe, Mathias & Søndergaard, M., 2011, In: Marine Chemistry. 126, 1-4, p. 139-148 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Global-scale processes with a nanoscale drive - the role of marine viruses

    Brussard, C. P. D., Wilhelm, S. W., Thinhstad, T. F., Weinbauer, T. F., Bratbak, M. G., Heldal, M., Kimmance, S. A., Middelboe, Mathias, Nagasaki, K., Paul, J. H., Schroeder, D. C., Suttle, C. A., Vaque, D. & Wommack, K. E., 2008, In: ISME Journal. 2, p. 575-578

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Havbunden - et levested for vigtige aktører i havets husholdning

    Glud, R. N. & Middelboe, Mathias, 2006, In: Naturens Verden. 11/12, p. 2-9

    Research output: Contribution to journalJournal articleResearch

  17. Published

    Heterogeneous distribution of prokaryotes and viruses at the microscale in a tidal sediment

    Carreira, C., Larsen, M., Glud, R. N., Brussaard, C. P. D. & Middelboe, Mathias, 2013, In: Aquatic Microbial Ecology. 69, 3, p. 183-192 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    High cell densities favor lysogeny: induction of an H20 prophage is repressed by quorum sensing and enhances biofilm formation in Vibrio anguillarum

    Tan, D., Hansen, Mads Frederik, de Carvalho, L. N., Røder, Henriette Lyng, Burmølle, Mette, Middelboe, Mathias & Svenningsen, Sine Lo, 2020, In: The ISME Journal. 14, 7, p. 1731-1742 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    High rates of microbial carbon turnover in sediments in the deepest oceanic trench on Earth

    Glud, R. N., Wenzhöfer, F., Middelboe, Mathias, Oguri, K., Turnewitsch, R., Canfield, D. E. & Kitazato, H., 2013, In: Nature Geoscience. 6, p. 284-288 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  20. Published

    Hydrostatic pressure induces transformations in the organic matter and microbial community composition of marine snow particles

    Stief, P., Schauberger, C., Becker, K. W., Elvert, M., Balmonte, J. P., Franco-Cisterna, B., Middelboe, Mathias & Glud, R. N., 2023, In: Communications Earth and Environment. 4, 1, 14 p., 377.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Increased acidification has a profound effect on the interactions between the cyanobacterium Synechococcus sp. WH7803 and its viruses

    Traving, Sachia Jo, Clokie, M. R. J. & Middelboe, Mathias, 2014, In: F E M S Microbiology Ecology. 87, 1, p. 133-141 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Influence of bacterial uptake on deep-ocean dissolved organic carbon

    Bendtsen, J., Lundsgaard, C., Middelboe, Mathias & Archer, D., 2002, In: Global Biogeochemical Cycles. vol. 16(0), p. 1-13

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Influence of sediment on pelagic carbon and nitrogen turnover in a shallow Danish estuary

    Middelboe, Mathias, Kroer, Niels, Jørgensen, N. O. G. & Pakulski, D., 1998, In: Microbial Ecology. 14, p. 81-90

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Interactions between Rainbow Trout Eyed Eggs and Flavobacterium spp. Using a Bath Challenge Model: Preliminary Evaluation of Bacteriophages as Pathogen Control Agents

    Donati, V. L., Dalsgaard, I., Runtuvuori-Salmela, A., Kunttu, H., Jørgensen, J., Castillo, D., Sundberg, L., Middelboe, Mathias & Madsen, L., 2021, In: Microorganisms. 9, 5, 31 p., 971.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Interactions between the Prophage 919TP and Its Vibrio cholerae Host: Implications of gmd Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility

    Li, N., Zeng, Y., Hu, B., Zhu, T., Svenningsen, Sine Lo, Middelboe, Mathias & Tan, D., 2021, In: Viruses. 13, 12, 15 p., 2342.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Isolation and characterization of a N4-like lytic bacteriophage infecting Vibrio splendidus, a pathogen of fish and bivalves

    Katharios, P., Kalatzis, Panagiotis, Kokkari, C., Sarropoulou, E. & Middelboe, Mathias, 28 Dec 2017, In: PLoS ONE. 12, 12, 14 p., e0190083.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Isolation and characterization of bacteriophages infecting the fish pathogen Flavobacterium psychrophilum

    Stenholm, A. R., Dalsgaard, I. & Middelboe, Mathias, 2008, In: Applied and Environmental Microbiology. 74, 13, p. 4070-4078

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Isolation and life cycle characterization of lytic viruses infecting heterotrophic bacteria and cyanobacteria

    Middelboe, Mathias, Chan, A. & Bertelsen, S. K., 2010, Manual of aquatic viral ecology. Wilhelm, S. W., Weinbauer, M. G. & Suttle, C. A. (eds.). Waco, Tex: American Society of Limnology and Oceanography, Inc., p. 118-33 16 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  29. Published

    Large Phenotypic and Genetic Diversity of Prophages Induced from the Fish Pathogen Vibrio anguillarum

    Castillo, D., Andersen, N., Kalatzis, Panagiotis & Middelboe, Mathias, 2019, In: Viruses. 11, 11, 15 p., 983.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts

    Holmfeldt, K., Middelboe, Mathias, Nybroe, O. & Riemann, L., 2007, In: Applied and Environmental Microbiology. 73, 21, p. 6730-6739 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Low virus to prokaryote ratios in the cold: benthic viruses and prokaryotes in a subpolar marine ecosystem (Hornsund, Svalbard)

    Wrobel, B., Filippini, M., Piwowarczyk, J., Kedra, M., Kulinski, K. & Middelboe, Mathias, 2013, In: International Microbiology. 16, p. 45-52 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Marine Viruses: Community Dynamics, Diversity and Impact on Microbial Processes

    Breitbart, M., Middelboe, Mathias & Rohwer, F., 2008, Microbial Ecology of the Oceans. Second Edition ed. IEEE Computer Society Press, p. 443-479

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  33. Published

    Marine viruses: key players in marine ecosystems

    Middelboe, Mathias & Brussaard, C. P. D., Oct 2017, In: Viruses. 9, 10, 6 p., 302.

    Research output: Contribution to journalEditorialResearch

  34. Published

    Measurements of particulate organic carbon: a note on the use of glass fiber (GF/F) and Anodisc R filters

    Søndergaard, M. & Middelboe, Mathias, 1993, In: Polskie Archiwum Hydrobiologii. 127, p. 73-85

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Microbial Disease in the Sea: Effects of Viruses on Marine Carbon and Nutrient Cycling

    Middelboe, Mathias, 2008, Infections Disease Ecology. Princeton University Press, p. 242-260

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  36. Published

    Microbial activity in the Greenland Sea: role of DOC lability, mineral nutrients and temperature.

    Middelboe, Mathias & Lundsgaard, C., 2003, In: Aquatic Microbial Ecology. 32, p. 151-163

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Microbial disease in the sea: Effects of viruses on carbon and nutrient cycling

    Middelboe, Mathias, 16 Dec 2010, Infectious Disease Ecology: Effects of Ecosystems on Disease and of Disease on Ecosystems. Princeton University Press, p. 242-259 18 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  38. Published

    Microscale spatial distributions of microbes and viruses in intertidal photosynthetic microbial mats

    Carreira, C., Piel, T., Staal, M. J., Stuut, J. W., Middelboe, Mathias & Brussaard, C. P. D., 2015, In: SpringerPlus. 4, 11 p., 239.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Nye studier af bakterieplanktonets økologi

    Middelboe, Mathias, Nielsen, B. & Søndergaard, M., 1992, In: Vand og miljø. 4, p. 115-118

    Research output: Contribution to journalJournal articleResearch

  40. Published

    Occurrence and bacterial cycling of D amino acid isomers in an estuarine environment

    Jørgensen, Niels O. G. & Middelboe, Mathias, 2006, In: Biogeochemistry. 81, 1, p. 77-94 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Oceanography and the base of the pelagic food web in the southern Indian Ocean

    Visser, A. W., Nielsen, T. G., Middelboe, Mathias, Høyer, J. L. & Markager, S., 2015, In: Journal of Plankton Research. 37, 3, p. 571-583 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    On Single-Cell Enzyme Assays in Marine Microbial Ecology and Biogeochemistry

    Traving, Sachia Jo, Balmonte, J. P., Seale, D., Arnosti, C., Glud, R. N., Hallam, S. J. & Middelboe, Mathias, 2022, In: Frontiers in Marine Science. 9, 9 p., 846656.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Phage defense mechanisms and their genomic and phenotypic implications in the fish pathogen Vibrio anguillarum

    Castillo, D., Rørbo, N., Jørgensen, J., Lange, J., Tan, D., Kalatzis, Panagiotis, Svenningsen, Sine Lo & Middelboe, Mathias, 2019, In: FEMS Microbiology Ecology. 95, 3, fiz004.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Phage-Mediated Control of Flavobacterium psychrophilum in Aquaculture: In vivo Experiments to Compare Delivery Methods

    Donati, V. L., Dalsgaard, I., Sundell, K., Castillo, D., Er-Rafik, M., Clark, J., Wiklund, T., Middelboe, Mathias & Madsen, L., 2021, In: Frontiers in Microbiology. 12, 16 p., 628309.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Phenotypic and Genetic Predictors of Pathogenicity and Virulence in Flavobacterium psychrophilum

    Sundell, K., Landor, L., Nicolas, P., Jørgensen, J., Castillo, D., Middelboe, Mathias, Dalsgaard, I., Donati, V. L., Madsen, L. & Wiklund, T., 2019, In: Frontiers in Microbiology. 10, 14 p., 1711.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Predation and selection for antibiotic resistance in natural environments

    Leisner, Jørgen, Jørgensen, Niels O. G. & Middelboe, Mathias, 2016, In: Evolutionary Applications (Online). 9, 3, p. 427-434 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Prevalence of genetically similar Flavobacterium columnare phages across aquaculture environments reveals a strong potential for pathogen control

    Runtuvuori-Salmela, A., Kunttu, H. M. T., Laanto, E., Almeida, G. M. F., Mäkelä, K., Middelboe, Mathias & Sundberg, L., 2022, In: Environmental Microbiology. 24, 5, p. 2404-2420 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Primer Registro de Abundancia Viral en Bahia Coliumo y Plataforma Continental Frente a Chile Central: First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile.

    Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Production and transformation of dissolved neutral sugars and amino acids by bacteria in seawater

    Jørgensen, L., Lechtenfeld, O. J., Benner, R., Middelboe, Mathias & Stedmon, C. A., 2014, In: Biogeosciences. 11, p. 5349-5363 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Proteinase production in Pseudomonas fluorescens ON2 is affected by carbon sources and allows surface-attached but not planktonic cells to utilize protein for growth in lake water

    Nicolaisen, Mette Haubjerg, Worm, J., Jørgensen, Niels O. G., Middelboe, Mathias & Nybroe, O., 2012, In: F E M S Microbiology Ecology. 80, 1, p. 168-178 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 8392