Department of Biology

 

 
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  1. 2020
  2. Published

    Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing

    Gummesson, Bertil, Shah, S. A., Borum, A. S., Fessler, M., Mitarai, Namiko, Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2020, In: Frontiers in Genetics. 11, 17 p., 144.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Vandplanternes artsrigdom og udbredelse i nye søer

    Båstrup-Spohr, Lars, Sø, Jonas Stage, Martinsen, K. T., Zak, N. B., Kristensen, E., Kragh, T., Søndergaard, M., Borum, Jens & Sand-Jensen, Kaj, 2020, In: Vand & Jord. 27, 4, p. 151-155 5 p.

    Research output: Contribution to journal › Journal article › Communication

  4. Published

    Variability of BVOC Emissions from Commercially Used willow (Salix spp.) Varieties

    Karlsson, T., Rinnan, Riikka & Holst, T., 2020, In: Atmosphere. 11, 4, 23 p., 356.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Vegetation and soil responses to added carbon and nutrients remain six years after discontinuation of long-term treatments

    Liu, N., Michelsen, Anders & Rinnan, Riikka, 2020, In: Science of the Total Environment. 722, 12 p., 137885.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Vidunderlig natur omkring Hobro for 150 år siden

    Schou, J. C. & Sand-Jensen, Kaj, 2020, In: URT. 44, 3, p. 8-15

    Research output: Contribution to journal › Journal article › Communication

  7. Published

    Vilde bier på Møn

    Madsen, Henning Bang & Rasmussen, C., 2020, 87 p.

    Research output: Book/Report › Report › Research › peer-review

  8. Published

    Virulence, Resistance, and Genomic Fingerprint Traits of Vibrio cholerae Isolated from 12 Species of Aquatic Products in Shanghai, China

    Fu, H., Yu, P., Liang, W., Kan, B., Peng, Xu & Chen, L., 2020, In: Microbial Drug Resistance. 26, 12, p. 1526-1539 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Volatile Organic Compound fluxes in a subarctic peatland and lake

    Seco, Roger, Holst, T., Westergaard-Nielsen, Andreas, Li, Tao, Simin, Tihomir, Jansen, J., Crill, P., Friborg, Thomas, Holst, J., Rinne, J. & Rinnan, Riikka, 2020. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  10. Published

    Volatile organic compound fluxes in a subarctic peatland and lake

    Seco, Roger, Holst, T., Matzen, M. S., Westergaard-Nielsen, Andreas, Li, Tao, Simin, Tihomir, Jansen, J., Crill, P., Friborg, Thomas, Rinne, J. & Rinnan, Riikka, 2020, In: Atmospheric Chemistry and Physics. 20, 21, p. 13399-13416

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Volume Regulation in Epithelia

    Larsen, Erik Hviid & Hoffmann, E. K., 2020, Ion Channels and Transporters of Epitheliain Health and Disease. Hamilton, K. L. & Devor, D. C. (eds.). 2 ed. Springer, Vol. 1. p. 395-460 (Physiology in Health and Disease).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  12. Published

    Våde lavbundsjorde rummer masser af muligheder

    Sand-Jensen, Kaj, 2020, In: Aktuel Naturvidenskab. 2, p. 23-25 3 p.

    Research output: Contribution to journal › Journal article › Communication

  13. Published

    What Is Extrachromosomal Circular DNA and What Does It Do?

    Chiu, R. W. K., Dutta, A., Hensson, A. G., Lo, Y. M. D., Mischel, P. & Regenberg, Birgitte, 2020, In: Clinical Chemistry. 66, 6, p. 754-759

    Research output: Contribution to journal › Editorial › Research › peer-review

  14. Published

    What Will Computational Modeling Approaches Have to Say in the Era of Atomistic Cryo-EM Data?

    Fraser, J. S., Lindorff-Larsen, Kresten & Bonomi, M., 2020, In: Journal of Chemical Information and Modeling. 60, 5, p. 2410-2412 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  15. Published

    Why Warburg Works: Lactate Controls Immune Evasion through GPR81

    Jørgensen, Kathrine Lundø, Trauelsen, Mette, Pedersen, Stine Helene Falsig & Schwartz, Thue W., 2020, In: Cell Metabolism. 31, 4, p. 666–668 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  16. Published

    Yeast recombinant production of intact human membrane proteins with long intrinsically disordered intracellular regions for structural studies

    Kassem, N., Kassem, M. M., Pedersen, Stine Helene Falsig, Pedersen, Per Amstrup & Kragelund, Birthe Brandt, 2020, In: Biochimica et Biophysica Acta - Biomembranes. 1862, 6, 14 p., 183272.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    You don’t have the guts: a diverse set of fungi survive passage through Macrotermes bellicosus termite guts [+ correction]

    Bos, N., Guimaraes, L., Palenzuela, R., Renelies-Hamilton, J., Maccario, Lorrie, Silue, S. K., Koné, N. A. & Poulsen, Michael, 2020, In: BMC Evolutionary Biology. 20, 11 p., 163.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    alpha M-Conotoxin MIIIJ Blocks Nicotinic Acetylcholine Receptors at Neuromuscular Junctions of Frog and Fish

    Rybin, M. J., O'Brien, H., Ramiro, Iris Bea L. , Azam, L., McIntosh, J. M., Olivera, B. M., Safavi-Hemami, H. & Yoshikami, D., 2020, In: Toxins. 12, 3, 29 p., 197.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    m6A-dependent biogenesis of circular RNAs in male germ cells

    Tang, C., Xie, Y., Yu, T., Liu, N., Wang, Z., Woolsey, R. J., Tang, Y., Zhang, X., Qin, W., Zhang, Y., Song, G., Zheng, W., Wang, J., Chen, W., Wei, X., Xie, Z., Klukovich, R., Zheng, H., Quilici, D. R. & Yan, W., 2020, In: Cell Research. 30, p. 211-228 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    scVAE: variational auto-encoders for single-cell gene expression data

    Grønbech, Christopher Heje, Vording, M. F., Timshel, P., Sønderby, C. K., Pers, Tune H & Winther, Ole, 2020, In: Bioinformatics. 36, 16, p. 4415-4422 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Ciliary Localization of the Intraflagellar Transport Protein IFT88 Is Disrupted in Cystic Fibrosis

    Stevens, E. M., Vladar, E. K., Alanin, M. C., Christensen, Søren Tvorup, von Buchwald, Christian & Milla, C., Jan 2020, In: American Journal of Respiratory Cell and Molecular Biology. 62, 1, p. 120-123 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Fiskeskæl fra 1930 fik laksen tilbage i Skjern Å

    Sand-Jensen, Kaj & Schou, J. C., 19 Jan 2020, In: Avisen Danmark. 1 p.

    Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

  23. Published

    Fiskeskæl fra 1930 fik vildlaksen tilbage i Skjern Å

    Sand-Jensen, Kaj & Schou, J. C., 27 Jan 2020, In: Vejle Amts Folkeblad.

    Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

  24. Published

    Exploring the Protein-Membrane Interactions on the Intracellular Side of PRLR

    Araya-Secchi, R., Bugge, K., Kragelund, Birthe Brandt & Arleth, Lise, 7 Feb 2020, In: Biophysical Journal. 118, 3, Suppl.1, p. 57A-57A 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  25. Published

    How pirate phage interferes with helper phage: Comparison of the two distinct strategies

    Mitarai, Namiko, 7 Feb 2020, In: Journal of Theoretical Biology. 486, 9 p., 110096.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Small-angle Neutron Scattering Shows that the Solution Structures of the Bacterial Mg2+-Channel CorA are Overall Similar with and without Mg2+ Bound

    Arleth, Lise, Johansen, Nicolai Tidemand, Bengtsen, T., Larsen, A. H., Tidemand, Frederik Grønbæk, Pomorski, Thomas Guenther & Lindorff-Larsen, Kresten, 7 Feb 2020, In: Biophysical Journal. 118, 3, Suppl. 1, p. 12A 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  27. Published

    The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4

    Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Internal leaf and meristem O2 and H2S dynamics of a tropical seagrass identify mechanisms of large-scale die-off events

    Johnson, C. R., Koch, M., McNicholl, C., Pedersen, Ole & Madden, C. J., 16 Feb 2020.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  29. Published

    Biologer om "Klimaskoven": Grov forenkling af virkeligheden og misvisende

    Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 9 Mar 2020, In: JA Aktuelt.

    Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

  30. Published

    Dynamics of bacterial populations under the feast-famine cycles

    Himeoka, Y. & Mitarai, Namiko, 27 Mar 2020, In: Physical Review Research. 2, 1, 15 p., 013372.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Forecasting Mood in Bipolar Disorder From Smartphone Self-assessments: Hierarchical Bayesian Approach

    Busk, J., Faurholt-Jepsen, M., Frost, M., Bardram, J. E., Kessing, Lars Vedel & Winther, Ole, 1 Apr 2020, In: JMIR mHealth and uHealth. 8, 4, 14 p., e15028.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Is wood ash amendment a suitable mitigation strategy for N2O emissions from soil?

    Bornø, Marie Louise, Rønn, Regin & Ekelund, Flemming, 15 Apr 2020, In: Science of the Total Environment. 713, p. 1-9 136581.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Simple attributes predict the importance of plants as hosts to the richness of fungi and arthropods

    Bruun, Hans Henrik, Brunbjerg, A. K., Dalby, L., Fløjgaard, C., Frøslev, Tobias Guldberg, Haarder, S., Heilmann-Clausen, Jacob, Høye, T. T., Læssøe, Thomas & Ejrnæs, R., 18 Apr 2020, bioRxiv, 27 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  34. Published

    Slope hydrology and permafrost: The effect of snowmelt N transport on downslope ecosystem

    Rasmussen, Laura Helene, Ambus, Per Lennart, Zhang, W., Jansson, P. E., Michelsen, Anders & Elberling, Bo, 1 May 2020. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  35. Published

    Vertical Migration Optimizes Photosynthetic Efficiency of Motile Cyanobacteria in a Coastal Microbial Mat

    Lichtenberg, Mads, Cartaxana, P. & Kühl, Michael, 25 May 2020, In: Frontiers in Marine Science. 7, 13 p., 359.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Notat om klimaeffekt af urørt skov: Sagsnotat

    Højgaard Petersen , A., Johannsen, VK, Rahbek, Carsten, Beier, Claus, Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Vesterdal, Lars, Bentsen, Niclas Scott, Gundersen, Per & Nord-Larsen, Thomas, 27 May 2020, 4 p..

    Research output: Memorandum/exposition › Memorandum

  37. Published

    Genopretning af biodiversitet og økosystemer i Danmark: Ekspertudtalelse

    Barfod, A., Bruun, Hans Henrik, Clausen, P., Dinesen, Lars, Egemose, S., Ejrnæs, R., Fløjgaard, C., Heilmann-Clausen, Jacob, Kragh, T., Petersen, Anders Højgård, Rahbek, Carsten, Roth, E., Raulund-Rasmussen, Karsten, Schou, Jesper Sølver, Svenning, J. & Søndergaard, M., Jun 2020, Det danske IPBES-samarbejde. 17 p.

    Research output: Book/Report › Report › Research › peer-review

  38. Published

    Vådområder bidrager markant til CO2-udledningen

    Sand-Jensen, Kaj, Martinsen, K. T. & Borum, Jens, 12 Jun 2020, In: Ingeniøren.

    Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

  39. Published

    Declining genetic diversity of European honeybees along the twentieth century

    Themudo, G. E., Rey de la Iglesia, Alba, Tascón, L. R., Jensen, Annette Bruun, Rodrigues da Fonseca, Rute Andreia & Campos, P. F., 29 Jun 2020, In: Scientific Reports. 10, 12 p., 10520.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Phylogenetic conservatism and biogeographic affinity influence woody plant species richness-climate relationships in eastern Eurasia

    Su, X., Shrestha, N., Xu, X., Sandanov, D., Wang, Q., Wang, S., Dimitrov, D. & Wang, Z., Jul 2020, In: Ecography. 43, 7, p. 1027-1040 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Wnt-mediated interactions of tumor-initiating cells with a macrophage niche drive skin tumor formation

    Fontenete, S., Christensen, J., Martinez-Silgado, A., Zarzuela, E., Muñoz, J., Megias, D., Castellana, D., Loewe, R. & Perez-Moreno, Mirna, 18 Jul 2020, bioRxiv, 58 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  42. Published

    Structure and dynamics of a nanodisc by integrating NMR, SAXS and SANS experiments with molecular dynamics simulations.

    Bengtsen, T., Midtgaard, S. R., Holm-Janas, Viktor, Kjølbye, L. R., Johansen, Nicolai Tidemand, Tesei, Giulio, Bottaro, S., Schiøtt, B., Arleth, Lise & Lindorff-Larsen, Kresten, 30 Jul 2020, In: eLife. 9, 24 p., e56518.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Ancient Genome Atlas

    Nørtoft, Mikkel & Schroeder, Hannes, 20 Aug 2020

    Research output: Non-textual form › Interactive production › Communication

  44. Published

    Orchestration of signaling by structural disorder in class 1 cytokine receptors

    Seiffert, P., Bugge, K., Nygaard, M., Haxholm, G. W., Martinsen, J. H., Pedersen, M. N., Arleth, Lise, Boomsma, Wouter & Kragelund, Birthe Brandt, 24 Aug 2020, In: Cell Communication and Signaling. 18, 1, 30 p., 132.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Eutrophication changes in fifty large lakes on the Yangtze Plain of China derived from MERIS and OLCI observations

    Guan, Qi, Feng, L., Hou, X., Schurgers, Guy, Zheng, Y. & Tang, Jing, 1 Sep 2020, In: Remote Sensing of Environment. 246, 111890.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Hovedbrud: Naturvidenskab og filosofi

    Hendricks, Vincent F. & Olsen, Johan Gotthardt, 29 Sep 2020, Gad. 233 p.

    Research output: Book/Report › Book › Education

  47. Published

    Bayesian protein superposition using Hamiltonian Monte Carlo

    Sanz Moreta, Lys, Al-Sibahi, A. S. & Hamelryck, Thomas Wim, Oct 2020, Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020. IEEE, p. 1-11 9288019

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  48. Published

    Tunen springer igen i Danmark

    Signe Wulff, S. W., 2 Oct 2020, In: Weekendavisen. Nr. 40, Nr. 40.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  49. Published

    Naturrigdom: Fisk, muslinger og ålegræs trives i Sundet

    Jeppesen, Jens Peder & Ø. Andersen, E., 18 Oct 2020, In: Dagbladet Politiken.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  50. Published

    On Phage Adsorption to Bacterial Chains

    Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 3 Nov 2020, In: Biophysical Journal. 119, 9, p. 1896-1904 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Videnskabelig uvidenhed og usikkerhed forklaret til børn

    Hendricks, Vincent F. & Olsen, Johan Gotthardt, 7 Nov 2020, In: videnskab.dk.

    Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

  52. Published

    Personalized B cell response to the Lactobacillus rhamnosus GG probiotic in healthy human subjects: a randomized trial

    Lange, Jette Bornholdt, Chen, Y., Rago, Alfredo, Sloth, S., Hendel, J., Melsæther, C., Müller, C. V., Juul Nielsen, M., Strickertsson, J., Engelholm, Lars Henning, Vitting-Seerup, K., Jensen, Kim Bak, Baker, A. & Sandelin, Albin Gustav, 9 Nov 2020, In: Gut Microbes. 12, 1, p. 1-14 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Børnevenlig forklaring: Hvad er induktion og generaliseringer?

    Hendricks, Vincent F. & Olsen, Johan Gotthardt, 15 Nov 2020, In: videnskab.dk.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  54. Published

    Forskere i biodiversitet: Vildere natur er ikke en trussel mod naturen

    Bruun, Hans Henrik, Svenning, J., Rahbek, Carsten, Heilmann-Clausen, Jacob, Hansen, M. D. D. & Ejrnæs, R., 17 Nov 2020, In: Altinget.dk.

    Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

  55. Published

    Drivhusgasser fra nye søer

    Davidson, T., Martinsen, K. T., Audet, J., Levi, E. E., Deng, J., Søndergaard, M., Egemose, S., Båstrup-Spohr, Lars & Sand-Jensen, Kaj, Dec 2020, In: Vand & Jord. 27, 4, p. 146-150

    Research output: Contribution to journal › Journal article › Communication

  56. Published

    The intracellular lipid-binding domain of human Na+/H+ exchanger 1 forms a lipid-protein co-structure essential for activity

    Hendus-Altenburger, R., Vogensen, J., Pedersen, E. S., Luchini, A., Araya-Secchi, R., Bendsoe, A. H., Prasad, N. S., Prestel, Andreas, Cardenas, M., Pedraz-Cuesta, E., Arleth, Lise, Pedersen, Stine Helene Falsig & Kragelund, Birthe Brandt, 3 Dec 2020, In: Communications Biology . 3, 1, 18 p., 731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. 2021
  58. Published

    (p)ppGpp-Dependent Regulation of the Nucleotide Hydrolase PpnN Confers Complement Resistance in Salmonella enterica Serovar Typhimurium

    Chau, N. Y. E., Pérez-Morales, D., Elhenawy, W., Bustamante, V. H., ZHANG, YONG & Coombes, B. K., 2021, In: Infection and Immunity. 89, 2, 14 p., e00639-20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    20 years of Zootaxa: Tardigrada (Ecdysozoa: Panarthropoda)

    McInnes, S. J., Jørgensen, Aslak & Michalczyk, Ł., 2021, In: Zootaxa. 4979, 1, p. 23-24 2 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  60. Published

    3D Adipose Tissue Culture Links the Organotypic Microenvironment to Improved Adipogenesis

    Shen, J. X., Couchet, M., Dufau, J., de Castro Barbosa, T., Ulbrich, M. H., Helmstädter, M., Kemas, A. M., Zandi Shafagh, R., Marques, M., Hansen, Jacob B., Mejhert, N., Langin, D., Rydén, M. & Lauschke, V. M., 2021, In: Advanced Science. 8, 16, 17 p., 2100106.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Butyribacter intestini gen. nov., sp. nov., a butyric acid-producing bacterium of the family Lachnospiraceae isolated from human faeces, and reclassification of Acetivibrio ethanolgignens as Acetanaerobacter ethanolgignens gen. nov., comb. nov

    Zou, Y., Xue, W., Lin, X., Lv, M., Luo, G., Dai, Y., Sun, H., Liu, S., Sun, C., Hu, T. & Xiao, L., 2021, In: Systematic and Applied Microbiology. 44, 3, 8 p., 126201.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Callithrix jacchus (the common marmoset)

    Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  64. Published

    Chloranthus genome provides insights into the early diversification of angiosperms

    Guo, X., Fang, D., Sahu, S. K., Yang, S., Guang, X., Folk, R., Smith, S. A., Chanderbali, A. S., Chen, S., Liu, M., Yang, T., Zhang, S., Liu, X., Xu, X., Soltis, P. S., Soltis, D. E. & Liu, Huan, 2021, In: Nature Communications. 12, 14 p., 6930.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Crystallicutis gen. nov. (Irpicaceae, Basidiomycota), including C. damiettensis sp. nov., found on Phoenix dactylifera (date palm) trunks in the Nile Delta of Egypt

    El-Gharabawy, H. M., A. Leal-Dutra, Caio & Griffith, G. W., 2021, In: Fungal Biology. 125, 6, p. 447-458 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope

    Gonçalves, M., Siegismund, Hans Redlef, Van Vuuren, B. J., Koepfli, K., Ferrand, N. & Godinho, R., 2021, In: G3: Genes, Genomes, Genetics. 11, 2, 9 p., jkab002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Giraffa camelopardalis

    Liu, C., Gao, J., Huang, J., Wang, W., Heller, Rasmus & Qiu, Q., 2021, In: Trends in Genetics. 37, 9, p. 860-861 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  68. Published

    Haslea silbo, A Novel Cosmopolitan Species of Blue Diatoms

    Gastineau, R., Hansen, G., Poulin, M., Lemieux, C., Turmel, M., Bardeau, J-F., Leignel, V., Hardivillier, Y., Morançais, M., Fleurence, J., Gaudin, P., Méléder, V., Cox, E. J., Davidovich, N. A., Davidovich, O. I., Witkowski, A., Kaczmarska, I., Ehrman, J. M., Onís, E. S., Quintana, A. M. & 11 others, Mucko, M., Mordret, S., Sarno, D., Jacquette, B., Falaise, C., Séveno, J., Lindquist, N. L., Kemp, P. S., Eker-Develi, E., Konucu, M. & Mouget, J., 2021, In: Biology. 10, 4, 27 p., 328.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Lobaria pulmonaria (L.) Hoffm. in the southwestern Baltic – Kattegat area

    Schiefelbein, U., Arnfred, T., Dolnik, C., Neumann, P., Ossowska, E., Poulsen, R., Søchting, Ulrik & Thell, A., 2021, In: Folia Cryptogamica Estonica. 58, p. 183-197

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Mammuthus sp. (Early and Middle Pleistocene Mammoths)

    Chrzanová Pecnerová, Patrícia, Díez-del-Molino, D., van der Valk, T., Dehasque, M., Götherström, A. & Dalén, L., 2021, In: Trends in Genetics. 37, 7, p. 682-683 2 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  71. Published

    Obscuroplaca gen. nov. – a replacement name for Phaeoplaca; Teloschistaceae (lichenized Ascomycota) from the Galapagos Islands

    Bungartz, F., Søchting, Ulrik & Arup, U., 2021, In: Plant and Fungal Systematics. 66, 2, p. 240-241 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  72. Published

    Saccharomyces cerevisiae as a superior host for overproduction of prokaryotic integral membrane proteins

    Preisler, Sarah Spruce, Wiuf, A. D., Friis, M., Kjaergaard, L., Hurd, M., Becares, E. R., Nurup, C. N., Bjoerkskov, F. B., Szathmáry, Z., Gourdon, Pontus Emanuel, Callø, Kirstine, Klærke, Dan Arne, Gotfryd, K. & Pedersen, Per Amstrup, 2021, In: Current research in structural biology. 3, p. 51-71 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    A Relationship between the Characteristics of the Oval Nucleus of the Mesopallium and Parrot Vocal Response to Playback

    Walløe, S., Chakraborty, M., Balsby, T. J. S., Jarvis, E. D., Dabelsteen, Torben & Pakkenberg, B., 2021, In: Brain, Behavior and Evolution. 96, 1, p. 37-48 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics

    Chen, F., Su, L., Hu, S., Xue, J., Liu, H., Liu, G., Jiang, Y., Du, J., Qiao, Y., Fan, Y., Liu, Huan, Yang, Q., Lu, W., Shao, Z., Zhang, J., Zhang, L., Chen, F. & Cheng, Z. (., 2021, In: Horticulture Research. 8, 13 p., 141.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    A community resource for paired genomic and metabolomic data mining

    Schorn, M. A., Verhoeven, S., Ridder, L., Huber, F., Acharya, D. D., Aksenov, A. A., Aleti, G., Moghaddam, J. A., Aron, A. T., Aziz, S., Bauermeister, A., Bauman, K. D., Baunach, M., Beemelmanns, C., Beman, J. M., Berlanga-Clavero, M. V., Blacutt, A. A., Bode, H. B., Boullie, A., Brejnrod, A. & 90 others, Bugni, T. S., Calteau, A., Cao, L., Carrión, V. J., Castelo-Branco, R., Chanana, S., Chase, A. B., Chevrette, M. G., Costa-Lotufo, L. V., Crawford, J. M., Currie, C. R., Cuypers, B., Dang, T., de Rond, T., Demko, A. M., Dittmann, E., Du, C., Drozd, C., Dujardin, J., Dutton, R. J., Edlund, A., Fewer, D. P., Garg, N., Gauglitz, J. M., Gentry, E. C., Gerwick, L., Glukhov, E., Gross, H., Gugger, M., Matus, D. G. G., Helfrich, E. J. N., Hempel, B., Hur, J., Iorio, M., Jensen, P. R., Kang, K. B., Kaysser, L., Kelleher, N. L., Kim, C. S., Kim, K. H., Koester, I., König, G. M., Leao, T., Lee, S. R., Lee, Y., Li, Xuan Ji, Little, J. C., Maloney, K. N., Männle, D., Martin H., C., McAvoy, A. C., Metcalf, W. W., Mohimani, H., Molina-Santiago, C., Moore, B. S., Mullowney, M. W., Muskat, M., Nothias, L., O'Neill, E. C., Parkinson, E. I., Petras, D., Piel, J., Pierce, E. C., Pires, K., Reher, R., Romero, D., Roper, M. C., Rust, M., Saad, H., Saenz, C., Sanchez, L. M., Sørensen, Søren Johannes, Sosio, M., Süssmuth, R. D., Sweeney, D., Tahlan, K., Thomson, R. J., Tobias, N. J., Trindade-Silva, A. E., van Wezel, G. P., Wang, M., Weldon, K. C., Zhang, F., Ziemert, N., Duncan, K. R., Crüsemann, M., Rogers, S., Dorrestein, P. C., Medema, M. H. & van der Hooft, J. J. J., 2021, In: Nature Chemical Biology. 17, 4, p. 363-368

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data

    Gabrielaite, M., Torp, M., Rasmussen, M., Andreu-Sánchez, S., Vieira, Filipe Garrett, Pedersen, C., Kinalis, S., Madsen, M., Yde, C., Rønn, O. L., Marvig, R., Østrup, O., Rossing, Caroline Maria, Nielsen, Finn Cilius, Winther, Ole & Bagger, F. O., 2021, bioRxiv, 29 p.

    Research output: Working paper › Preprint › Research

  77. Published

    A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data

    Gabrielaite, M., Torp, M. H., Rasmussen, Malthe Sebro, Andreu-Sánchez, S., Vieira, Filipe Garrett, Pedersen, C. B., Kinalis, S., Madsen, M. B., Kodama, M., Demircan, G. S., Simonyan, A., Yde, C. W., Olsen, L. R., Marvig, R. L., Østrup, O., Rossing, Caroline Maria, Nielsen, Finn Cilius, Winther, Ole & Bagger, F. O., 2021, In: Cancers. 13, 24, 6283.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    A complex of BRCA2 and PP2A-B56 is required for DNA repair by homologous recombination

    Ambjørn, Sara Marie, Duxin, Julien, Hertz, Emil Peter Thrane, Nasa, I., Duro, Joana Maria, Kruse, Thomas, Lopez-Mendez, B., Rymarczyk, B., Cressey, L. E., van Overeem Hansen, T., Kettenbach, A. N., Østergaard, Vibe Hallundbæk, Lisby, Michael & Nilsson, Jakob, 2021, In: Nature Communications. 12, 1, 11 p., 5748.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    A dual-reporter system for investigating and optimizing protein translation and folding in E. coli

    Zutz, A., Hamborg, L., Pedersen, L. E., Kassem, M. M., Papaleo, E., Koza, A., Herrgård, M. J., Ingemann Jensen, S., Teilum, Kaare, Lindorff-Larsen, Kresten & Nielsen, A. T., 2021, In: Nature Communications. 12, 15 p., 6093.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    A genome-wide association study for gut metagenome in Chinese adults illuminates complex diseases

    Liu, X., Tang, S., Zhong, H., Tong, X., Jie, Z., Ding, Q., Wang, D., Guo, R., Xiao, L., Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Liu, X., Zhang, Y., Brix, S., Kristiansen, K., Hou, Y., Jia, H. & 1 others, Zhang, T., 2021, In: Cell Discovery. 7, 15 p., 9.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    A global perspective on the application of riverine macroinvertebrates as biological indicators in Africa, South-Central America, Mexico and Southern Asia

    Eriksen, T. E., Brittain, J. E., Søli, G., Jacobsen, Dean, Goethals, P. & Friberg, N., 2021, In: Ecological Indicators. 126, 17 p., 107609.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    A guide for field studies and environmental monitoring of mixoplankton populations

    Mitra, A. (ed.), Gypens, N. (ed.), Hansen, Per Juel (ed.) & Flynn, K. J. (ed.), 2021, Zenodo.

    Research output: Book/Report › Report › Research

  83. Published

    A large-scale genome-wide gene expression analysis in peripheral blood identifies very few differentially expressed genes related to antidepressant treatment and response in patients with major depressive disorder

    Nøhr, A. K., Lindow, M., Forsingdal, A., Demharter, S., Nielsen, T., Buller, R., Moltke, Ida, Vitezic, M. & Albrechtsen, Anders, 2021, In: Neuropsychopharmacology. 46, 7, p. 1324-1332 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    A new cave-dwelling genus and species of Nerillidae (Annelida) from the Ryukyu Islands, Japan

    Worsaae, Katrine, Hansen, M. J., Axelsen, O., Kakui, K., Møller, Peter Rask, Osborn, K. J., Martínez, A., Gonzalez, B. C., Miyamoto, N. & Fujita, Y., 2021, In: Marine Biodiversity. 51, 4, 18 p., 67.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals

    Li, J., Zhang, J., Liu, J., Zhou, Y., Cai, C., Xu, L., Dai, X., Feng, S., Guo, C., Rao, J., Wei, K., Jarvis, E. D., Jiang, Y., Zhou, Z., KU, thw266 & Zhou, Q., 2021, In: GigaScience. 10, 1, 15 p., giaa142.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes

    Liu, J., Wang, Z., Li, J., Xu, L., Liu, J., Feng, S., Guo, C., Chen, S., Ren, Z., Rao, J., Wei, K., Chen, Y., Jarvis, E. D., KU, thw266 & Zhou, Q., 2021, In: Genome Research. 31, 3, p. 497-511 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    A new extinct species of Polynesian sandpiper (Charadriiformes: Scolopacidae: Prosobonia) from Henderson Island, Pitcairn Group, and the phylogenetic relationships of Prosobonia

    De Pietri, V. L., Worthy, T. H., Scofield, R. P., Cole, T. L., Wood, J. R., Mitchell, K. J., Cibois, A., Jansen, J. J. F. J., Cooper, A. J., Feng, S., Chen, W., Tennyson, A. J. & Wragg, G. M., 2021, In: Zoological Journal of the Linnean Society. 192, 4, p. 1045-1070

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    A new species of the Y-larva genus Hansenocaris Itô, 1985 (Crustacea: Thecostraca: Facetotecta) from the Azores, with notes on its morphology and biogeography

    Kolbasov, G. A., Savchenko, A. S. & Høeg, Jens Thorvald, 2021, In: Arthropoda Selecta. 30, 3, p. 341-350 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    A nutrient-responsive hormonal circuit mediates an inter-tissue program regulating metabolic homeostasis in adult Drosophila

    Koyama, Takashi, Terhzaz, S., Naseem, Muhammad Tayyib, Nagy, S., Rewitz, Kim, Dow, J. A. T., Davies, S. A. & Halberg, Kenneth Veland, 2021, In: Nature Communications. 12, 19 p., 5178.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    A porcine brain-wide RNA editing landscape

    Huang, J., Lin, L., Dong, Z., Yang, L., Zheng, T., Gu, W., Zhang, Y., Yin, T., Sjöstedt, E., Mulder, J., Uhlén, M., Kristiansen, Karsten, Bolund, L. & Luo, Y., 2021, In: Communications Biology . 4, 12 p., 717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    A reference-free approach to analyse RADseq data using standard next generation sequencing toolkits

    Heller, Rasmus, Nursyifa, Casia, Garcia Erill, Genís, Salmona, J., Chikhi, L., Meisner, Jonas, Korneliussen, Thorfinn Sand & Albrechtsen, Anders, 2021, In: Molecular Ecology Resources. 21, 4, p. 1085-1097 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    A tipping point in carbon storage when forest expands into tundra is related to mycorrhizal recycling of nitrogen

    Clemmensen, K. E., Durling, M. B., Michelsen, Anders, Hallin, S., Finlay, R. D. & Lindahl, B. D., 2021, In: Ecology Letters. 24, 6, p. 1193-1204 12 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  93. Published

    A towering genome: Experimentally validated adaptations to high blood pressure and extreme stature in the giraffe

    Liu, C., Gao, J., Cui, X., Li, Z., Chen, L., Yuan, Y., Zhang, Y., Mei, L., Zhao, L., Cai, D., Hu, M., Zhou, B., Li, Z., Qin, T., Si, H., Li, G., Lin, Z., Xu, Y., Zhu, C., Yin, Y. & 9 others, Zhang, C., Xu, W., Li, Q., Wang, K., Gilbert, M Thomas P, Heller, Rasmus, Wang, W., Huang, J. & Qiu, Q., 2021, In: Science Advances. 7, 12, 13 p., eabe9459.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    A transomic cohort as a reference point for promoting a healthy human gut microbiome

    Jie, Z., Liang, S., Ding, Q., Li, F., Tang, S., Wang, D., Lin, Y., Chen, P., Cai, K., Qiu, X., Li, Q., Liao, Y., Zhou, D., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J. & 17 others, Wang, R., Zhou, H., Lu, H., Wang, X., Zhang, W., Zhang, T., Xiao, L., Zong, Y., Liu, W., Yang, H., Wang, J., Hou, Y., Liu, X., Kristiansen, Karsten, Zhong, H., Jia, H. & Xu, X., 2021, In: Medicine in Microecology. 8, 10 p., 100039.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    A type III-A CRISPR-Cas system mediates co-transcriptional DNA cleavage at the transcriptional bubbles in close proximity to active effectors

    Lin, Jinzhong, Shen, Y., Ni, J. & She, Q., 2021, In: Nucleic Acids Research. 49, 13, p. 7628-7643 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    A unique Malpighian tubule architecture in Tribolium castaneum informs the evolutionary origins of systemic osmoregulation in beetles

    Koyama, Takashi, Naseem, Muhammad Tayyib, Kolosov, D., Vo, C. T., Mahon, D., Jakobsen, A. S. S., Jensen, R. L., Denholm, B., O'Donnell, M. & Halberg, Kenneth Veland, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 14, 12 p., e2023314118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    ALMS1 Regulates TGF-β Signaling and Morphology of Primary Cilia

    Álvarez-Satta, M., Lago-Docampo, M., Bea-Mascato, B., Solarat, C., Castro-Sánchez, S., Christensen, Søren Tvorup & Valverde, D., 2021, In: Frontiers in Cell and Developmental Biology. 9, 8 p., 623829.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Ab initio determination of the shape of membrane proteins in a nanodisc

    Orioli, S., Hansen, C. G. H. & Arleth, Lise, 2021, In: Acta crystallographica Section D: Structural biology . 77, p. 176-193 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Accurate model of liquid-liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties

    Tesei, Giulio, Schulze, T. K., Crehuet, R. & Lindorff-Larsen, Kresten, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 44, 10 p., e2111696118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Activating the Cpx response induces tolerance to antisense PNA delivered by an arginine-rich peptide in Escherichia coli

    Frimodt-Møller, Jakob, Koulouktsis, A., Charbon, Godefroid, Otterlei, M., Nielsen, Peter E. & Løbner-Olesen, Anders, 2021, In: Molecular Therapy - Nucleic Acids. 25, p. 444-454 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Adipose MDM2 regulates systemic insulin sensitivity

    Hallenborg, P., Jensen, Benjamin Anderschou Holbech, Fjære, E., Petersen, R. K., Belmaâti, M. S., Rasmussen, S. S., Gunnarsson, J. P., Lauritzen, P., Cheng, K. K. Y., Hermansson, M., Sonne, Si Brask, Ejsing, C. S., Xu, A., Kratchmarova, I., Krüger, M., Madsen, L., Kristiansen, Karsten & Blagoev, B., 2021, In: Scientific Reports. 11, 17 p., 21839.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    African lungfish genome sheds light on the vertebrate water-to-land transition

    Wang, K., Wang, J., Zhu, C., Yang, L., Ren, Y., Ruan, J., Fan, G., Hu, J., Xu, W., Bi, X., Zhu, Y., Song, Y., Chen, H., Ma, T., Zhao, R., Jiang, H., Zhang, B., Feng, C., Yuan, Y., Gan, X. & 16 others, Li, Y., Zeng, H., Liu, Q., Zhang, Y., Shao, F., Hao, S., Zhang, H., Xu, X., Liu, X., Wang, D., Zhu, M., KU, thw266, Zhao, W., Qiu, Q., He, S. & Wang, W., 2021, In: Cell. 184, 5, p. 1362-1376.e18 33 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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