Functional Genomics

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  1. Published

    Phylogeography, hybridization and Pleistocene refugia of the kob antelope (Kobus kob)

    Lorenzen, E. D., De Neergaard, R., Arctander, P. & Siegismund, Hans Redlef, 2007, In: Molecular Ecology. 16, 15, p. 3241-52 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Constitutive STAT3 activation in intestinal T cells from patients with Crohn's disease

    Lovato, P., Brender, C., Agnholt, J., Kelsen, J., Kaltoft, K., Svejgaard, A., Eriksen, K. W., Woetmann, Anders & Ødum, Niels, 2003, In: Journal of Biological Chemistry. 278, 19, p. 16777-81 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    SHP2 regulates IL-2 induced MAPK activation, but not Stat3 or Stat5 tyrosine phosphorylation, in cutaneous T cell lymphoma cells

    Lundin Brockdorff, J., Woetmann, Anders , Mustelin, T., Kaltoft, K., Zhang, Q., Wasik, M. A., Röpke, C. & Ødum, Niels, 2002, In: Cytokine. 20, 4, p. 141-7 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Diverse gene functions in a soil mobilome

    Luo, W., Xu, Z., Riber, Leise, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Soil Biology & Biochemistry. 101, p. 175-183 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Beringian paleoecology inferred from permafrost-preserved fungal DNA

    Lydolph, M. C., Jacobsen, J., Arctander, P., Gilbert, M Thomas P, Gilichinsky, D. A., Hansen, Anders Johannes, Willerslev, Eske & Lange, L., 2005, In: Applied and Environmental Microbiology. 71, 2, p. 1012-7 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Characterization of three genes in the dam-containing operon of Escherichia coli

    Lyngstadaas, A., Løbner-Olesen, Anders & Boye, E., 10 Jun 1995, In: Molecular General Genetics. 247, 5, p. 546-54 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A sparsomycin-resistant mutant of Halobacterium salinarium lacks a modification at nucleotide U2603 in the peptidyl transferase centre of 23 S rRNA

    Lázaro, E., Rodriguez-Fonseca, C., Porse, Bo Torben, Ureña, D., Garrett, Roger Antony & Ballesta, J. P. G., 16 Aug 1996, In: Journal of Molecular Biology. 261, 2, p. 231-238 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Mutations in the RAM network confer resistance to the thiol oxidant 4,4'-dipyridyl disulfide

    López-Mirabal, H. R., Winther, Jakob R., Thorsen, M. & Kielland-Brandt, M. C., 2008, In: Molecular Genetics and Genomics. 279, 6, p. 629-42 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The influence of pressure on the intrinsic dissolution rate of amorphous indomethacin

    Löbmann, Korbinian, Flouda, K., Qiu, D., Tsolakou, T., Wang, W. & Rades, Thomas, 2014, In: Pharmaceutics. 6, 3, p. 481-93 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Chromosome partitioning in Escherichia coli

    Løbner-Olesen, Anders & Kuempel, P. L., Dec 1992, In: Journal of Bacteriology. 174, 24, p. 7883-9 7 p.

    Research output: Contribution to journal › Review › Research › peer-review

  11. Published

    The DnaA protein determines the initiation mass of Escherichia coli K-12

    Løbner-Olesen, Anders, Skarstad, K., Hansen, F. G., von Meyenburg, K. & Boye, E., 2 Jun 1989, In: Cell. 57, 5, p. 881-9 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Expression of the Escherichia coli dam gene

    Løbner-Olesen, Anders, Boye, E. & Marinus, M. G., Jul 1992, In: Molecular Microbiology. 6, 13, p. 1841-51 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Identification of the gene (aroK) encoding shikimic acid kinase I of Escherichia coli

    Løbner-Olesen, Anders & Marinus, M. G., Jan 1992, In: Journal of Bacteriology. 174, 2, p. 525-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Different effects of mioC transcription on initiation of chromosomal and minichromosomal replication in Escherichia coli

    Løbner-Olesen, Anders & Boye, E., 25 Jun 1992, In: Nucleic Acids Research. 20, 12, p. 3029-36 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Stability and replication control of Escherichia coli minichromosomes

    Løbner-Olesen, Anders, Atlung, T. & Rasmussen, K. V., Jun 1987, In: Journal of Bacteriology. 169, 6, p. 2835-42 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Regulation of Ribonucleotide Reductase and Screening for Species-Specific Inhibitors in Fission Yeast

    Løvschal, K. V., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    Cdc14 phosphatase: warning, no delay allowed for chromosome segregation!

    Machín, F., Quevedo Rodriguez, O., Ramos-Pérez, C. & García-Luis, J., 2016, In: Current Genetics. 62, 1, p. 7-13 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Identification and characterization of barley RNA-directed RNA polymerases

    Madsen, C. T., Stephens, J., Hornyik, C., Shaw, J., Collinge, David B., Lacomme, C. & Albrechtsen, M. T., 2009, In: BBA General Subjects. 1789, 5, p. 375-385 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Biotin starvation causes mitochondrial protein hyperacetylation and partial rescue by the SIRT3-like deacetylase Hst4p

    Madsen, C. T., Sylvestersen, K. B., Young, C., Buch-Larsen, Sara Charlotte, Poulsen, J. W., Andersen, M. A., Palmqvist, E. A., Hey-Mogensen, M., Jensen, P. B., Treebak, Jonas Thue, Lisby, Michael & Nielsen, Michael Lund, 2015, In: Nature Communications. 6, 12 p., 7726.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Design and Combinatorial Development of Shield-1 Peptide Mimetics Binding to Destabilized FKBP12

    Madsen, D., Jørgensen, F. P., Palmer, D., Roux, M. E., Olsen, J. V., Bols, Mikael, Schoffelen, S., Diness, Frederik & Meldal, Morten Peter, 2020, In: ACS Combinatorial Science. 22, 3, p. 156-164

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    An intriguing relationship between the cyclic diguanylate signaling system and horizontal gene transfer

    Madsen, Jonas Stenløkke, Hylling, Ole, Jacquiod, S. J. A., Pécastaings, S., Hansen, L. H., Riber, Leise, Vestergaard, G. A. & Sørensen, Søren Johannes, 2018, In: ISME Journal. 12, 9, p. 2330-2334 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Antibiotic Tolerance and Persistence Studied Throughout Bacterial Growth Phases

    Maffei, E., Fino, C. & Harms, A., 2021, Bacterial Persistence: Methods and Protocols. Verstraeten, N. & Michiels, J. (eds.). 2. ed. ed. Humana Press, p. 23-40 18 p. (Methods in Molecular Biology, Vol. 2357).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants

    Makarova, K. S., Wolf, Y. I., Iranzo, J., Shmakov, S. A., Alkhnbashi, O. S., Brouns, S. J. J., Charpentier, E., Cheng, D., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Scott, D., Shah, S. A., Siksnys, V., Terns, M. P., Venclovas, Č., White, M. F., Yakunin, A. F., Yan, W. & 6 others, Zhang, F., Garrett, Roger Antony, Backofen, R., van der Oost, J., Barrangou, R. & Koonin, E. V., 2020, In: Nature Reviews. Microbiology. 18, p. 67-83

    Research output: Contribution to journal › Review › Research › peer-review

  24. Published

    Predicted highly derived class 1 CRISPR-Cas system in Haloarchaea containing diverged Cas5 and Cas7 homologs but no CRISPR array

    Makarova, K. S., Karamycheva, S., Shah, S. A., Vestergaard, G. A., Garrett, Roger Antony & Koonin, E. V., 2019, In: FEMS Microbiology Letters. 366, 7, 5 p., fnz079.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    An updated evolutionary classification of CRISPR-Cas systems

    Makarova, K. S., Wolf, Y. I., Alkhnbashi, O. S., Costa, F., Shah, S. A., Saunders, S. J., Barrangou, R., Brouns, S. J. J., Charpentier, E., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Terns, R. M., Terns, M. P., White, M. F., Yakunin, A. F., Garrett, R. A., van der Oost, J., Backofen, R. & 1 others, Koonin, E. V., 2015, In: Nature Reviews. Microbiology. 13, 11, p. 722-736 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Fission yeast Swi2 designates cell-type specific donor and stimulates Rad51-driven strand exchange for mating-type switching

    Maki, T., Thon, Genevieve & Iwasaki, H., 2023, In: Nucleic acids symposium series. 51, 8, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    New insights into donor directionality of mating-type switching in Schizosaccharomyces pombe

    Maki, T., Ogura, N., Haber, J. E., Iwasaki, H. & Thon, Genevieve, May 2018, In: PLOS Genetics. 14, 5, p. 1-25 e1007424.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Lazarus1, a DUF300 protein, contributes to programmed cell death associated with Arabidopsis acd11 and the hypersensitive response

    Malinovsky, F. G., Brodersen, P., Fiil, Berthe Katrine, McKinney, L. V., Thorgrimsen, S., Beck, M., Nielsen, H. B., Pietra, S., Zipfel, C., Robatzek, S., Petersen, Morten, Hofius, D. & Mundy, J., 2010, In: P L o S One. 5, 9, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Novel death regulators in plant immunity

    Malinovsky, F. G., 2009, Biologisk Institut: Museum Tusculanum. 55 p.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    Structural basis for inhibition of an archaeal CRISPR–Cas type I-D large subunit by an anti-CRISPR protein

    Manav, M. C., Van, L. B., Lin, Jinzhong, Fuglsang, Anders, Peng, Xu & Brodersen, D. E., 2020, In: Nature Communications. 11, 10 p., 5993.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain

    Manav, M. C., Turnbull, K. J., Jurėnas, D., Garcia-Pino, A., Gerdes, K. & Brodersen, D. E., 2019, In: Structure. 27, 11, p. 1675-1685, e1-e3

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Single site suppressors of a fission yeast temperature-sensitive mutant in cdc48 identified by whole genome sequencing

    Marinova, I. N., Engelbrecht, J., Ewald, A., Langholm, L. L., Holmberg, Christian, Kragelund, Birthe Brandt, Gordon, C., Nielsen, Olaf & Hartmann-Petersen, Rasmus, 2015, In: P L o S One. 10, 2, 15 p., e0117779.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    DNA Methylation

    Marinus, M. G. & Løbner-Olesen, Anders, 2014, Synthesis and Processing of Macromolecules. Lovett, S. T. (ed.). ASM Press, (EcoSal Plus: Domain 4).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  34. Published

    A Critical Role for Dna2 at Unwound Telomeres

    Markiewicz-Potoczny, M., Lisby, Michael & Lydall, D., 2018, In: Genetics. 209, 1, p. 129-141 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Quantitative analysis of promoter architecture and gene regulation

    Marstrand, T. T., 2009, Biologisk Institut: Museum Tusculanum. 33 p.

    Research output: Book/Report › Ph.D. thesis › Research

  36. Published

    Multiple consecutive initiation of replication producing novel brush-like intermediates at the termini of linear viral dsDNA genomes with hairpin ends.

    Martinez Alvarez, Laura, Bell, S. D. & Peng, Xu, 2016, In: Nucleic Acids Research. 44, 18, p. 8799-8809 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Formation of a viral replication focus in Sulfolobus cells infected by the rudivirus Sulfolobus islandicus rod-shaped virus 2

    Martinez Alvarez, Laura, Deng, Ling & Peng, Xu, Jul 2017, In: Journal of Virology. 91, 13, 12 p., e00486-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Erratum: Formation of a viral replication focus in Sulfolobus cells infected by the rudivirus Sulfolobus islandicus rod-shaped virus 2 [Journal of Virology, 91, 13, (2017), (e00486-17)] DOI:10.1128/JVI.00486-17

    Martinez Alvarez, Laura, Deng, Ling & Peng, Xu, 1 Apr 2018, In: Journal of Virology. 92, 7, e01991-17.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  39. Published

    Three genetically divergent lineages of the Oryx in eastern Africa: Evidence for an ancient introgressive hybridization

    Masembe, C., Muwanika, V. B., Nyakaana, S., Arctander, P. & Siegismund, Hans Redlef, 2006, In: Conservation Genetics. 7, 4, p. 551-562

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Physical mapping and cloning of RAD56

    Mathiasen, D. P., Gallina, I., Germann, S. M., Hamou, W., Eléouët, M., Thodberg, S., Eckert-Boulet, N., Game, J. & Lisby, Michael, 25 Apr 2013, In: Gene. 519, 1, p. 182-186 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Cell cycle regulation of homologous recombination in Saccharomyces cerevisiae

    Mathiasen, D. P. & Lisby, Michael, 2014, In: F E M S Microbiology Reviews. 38, 2, p. 172-184 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Solanimycin: Biosynthesis and Distribution of a New Antifungal Antibiotic Regulated by Two Quorum-Sensing Systems

    Matilla, M. A., Monson, R. E., Murphy, A., Schicketanz, Muriel Leandra, Rawlinson, A., Duncan, C., Mata, J., Leeper, F. & Salmond, G. P. C., 2022, In: mBio. 13, 6, 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Anti-CRISPR-Based and CRISPR-Based Genome Editing of Sulfolobus islandicus Rod-Shaped Virus 2

    Mayo-Muñoz, D., He, F., Jørgensen, J. B., Madsen, P. K., Bhoobalan, Yuvaraj & Peng, Xu, 2018, In: Viruses. 10, 12, p. 1-17 695.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Exceptional thermal stability and organic solvent tolerance of an esterase expressed from a thermophilic host

    Mei, Y., Peng, N., Zhao, S., Hu, Y., Wang, H., Liang, Y. & She, Q., 2012, In: Applied Microbiology and Biotechnology. 93, 5, p. 1965-1974 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Gibberellin response mutants identified by luciferase imaging

    Meier, C., Bouquin, T., Nielsen, Mads Eggert, Raventos, D., Mattsson, O., Rocher, A., Schomburg, F., Amasino, R. & Mundy, J., 2001, In: Plant Journal.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The pearl millet mitogen-activated protein kinase PgMPK4 is involved in responses to downy mildew infection and in jasmonic- and salicylic acid-mediated defense

    Melvin, P., Prabhu, S. A., Veena, M., Shailasree, S., Petersen, Morten, Mundy, J., Shetty, S. H. & Kini, K. R., 2015, In: Plant Molecular Biology. 87, 3, p. 287-302 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Coping with Reactive Oxygen Species to Ensure Genome Stability in Escherichia coli

    Mendoza-Chamizo, B., Løbner-Olesen, Anders & Charbon, Godefroid, 2018, In: Genes. 9, 11, 565.

    Research output: Contribution to journal › Review › Research › peer-review

  48. Published

    Comparative metagenomics of eight geographically remote terrestrial hot springs

    Menzel, P., Islin, S. R., Rike, A. G., Lin, L., Zhang, Q., Contursi, P., Moracci, M., Kristjansson, J. K., Bolduc, B., Gavrilov, S., Ravin, N., Mardanov, A., Bonch-Osmolovskaya, E., Young, M., Krogh, Anders & Peng, Xu, 2015, In: Microbial Ecology. 70, 2, p. 411-424 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Haploinsufficiency of the retinoblastoma protein gene reduces diet-induced obesity, insulin resistance, and hepatosteatosis in mice

    Mercader, J., Ribot, J., Murano, I., Feddersen, S., Cinti, S., Madsen, L., Kristiansen, Karsten, Bonet, M. L. & Palou, A., 2009, In: American Journal of Physiology: Endocrinology and Metabolism. 297, 1, p. E184-E193

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Replication Fork Breakage and Restart in Escherichia coli

    Michel, B., Sinha, A. K. & Leach, D. R. F., 2018, In: Microbiology and Molecular Biology Reviews. 82, 3, 19 p., e00013-18.

    Research output: Contribution to journal › Review › Research › peer-review

  51. Published

    Compartment-specific aggregases direct distinct nuclear and cytoplasmic aggregate deposition

    Miller, S. B., Ho, C., Winkler, J., Khokhrina, M., Neuner, A., Mohamed, M. Y., Guilbride, D. L., Richter, K., Lisby, Michael, Schiebel, E., Mogk, A. & Bukau, B., 2015, In: E M B O Journal. 34, 6, p. 778-797 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Secretion of alpha-hemolysin by Escherichia coil disrupts tight junctions in ulcerative colitis patients

    Mirsepasi-Lauridsen, H. C., Du, Z., Struve, C., Charbon, Godefroid, Karczewski, J., Krogfelt, K. A., Petersen, A. M. & Wells, J. M., 2016, In: Clinical and Translational Gastroenterology. 7, 9 p., e149.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies

    Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    The role of HERC2 and RNF8 ubiquitin E3 ligases in the promotion of translesion DNA synthesis in the chicken DT40 cell line

    Mohiuddin, M., Kobayashi, S., Keka, I. S., Guilbaud, G., Sale, J., Narita, Takeo, Abdel-Aziz, H. I., Wang, X., Ogawa, S., Sasanuma, H., Chiu, R., Østergaard, Vibe Hallundbæk, Lisby, Michael & Takeda, S., Apr 2016, In: DNA Repair. 40, p. 67-76 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Discovery and seminal developments in the CRISPR field

    Mojica, F. J. M. & Garrett, Roger Antony, 2013, CRISPR-Cas Systems: RNA-mediated Adaptive Immunity in Bacteria and Archaea. Barrangou, R. & van der Oost, J. (eds.). Springer VS, p. 1-31 31 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  56. Published

    Structure of Csx1-cOA4 complex reveals the basis of RNA decay in Type III-B CRISPR-Cas

    Molina, R., Stella, S., Feng, M., Sofos, N., Jauniskis, V., Pozdnyakova, I., López-Méndez, B., She, Q. & Montoya, Guillermo, 2019, In: Nature Communications. 10, 14 p., 4302.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Rad10 exhibits lesion-dependent genetic requirements for recruitment to DNA double-strand breaks in Saccharomyces cerevisiae

    Moore, D. M., Karlin, J., González-Barrera, S., Mardiros, A., Lisby, Michael, Doughty, A., Gilley, J., Rothstein, R., Friedberg, E. C. & Fischhaber, P. L., 2009, In: Nucleic Acids Research. 37, 19, p. 6429-38 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Neither Reb1p nor poly(dA*T) elements are responsible for the highly specific chromatin organization at the ILV1 promoter

    Moreira, José, Hörz, W. & Holmberg, Steen, 2001, In: Journal of Biological Chemistry. 277, 5, p. 3202-9 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p

    Moreira, José, Remacle, J. E., Kielland-Brandt, M. & Holmberg, Steen, 1998, In: Molecular and General Genetics. 258, 1-2, p. 95-103 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Nucleosome structure of the yeast CHA1 promoter: analysis of activation-dependent chromatin remodeling of an RNA-polymerase-II-transcribed gene in TBP and RNA pol II mutants defective in vivo in response to acidic activators

    Moreira, José & Holmberg, Steen, 1998, In: E M B O Journal. 17, 20, p. 6028-38 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC

    Moreira, José & Holmberg, Steen, 1999, In: E M B O Journal. 18, 10, p. 2836-44 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data

    Morin, S., Linnet, T. E., Lescanne, M., Schanda, P., Thompson, G. S., Tollinger, M., Teilum, Kaare, Gagne, S., Marion, D., Griesinger, C., Blackledge, M. & d’Auvergne, E. J., 2014, In: Bioinformatics. 30, 15, p. 2219-2220 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Rad52

    Mortensen, U. H., Lisby, Michael & Rothstein, R., 2009, In: Current Biology. 19, 16, p. R676-7

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Break-induced ATR and Ddb1-Cul4(Cdt)² ubiquitin ligase-dependent nucleotide synthesis promotes homologous recombination repair in fission yeast

    Moss, J., Tinline-Purvis, H., Walker, C. A., Folkes, L. K., Stratford, M. R., Hayles, J., Hoe, K., Kim, D., Park, H., Kearsey, S. E., Fleck, O., Holmberg, Christian, Nielsen, Olaf & Humphrey, T. C., 1 Dec 2010, In: Genes & Development. 24, 23, p. 2705-16 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Gene expression analysis of the emergence of epileptiform activity after focal injection of kainic acid into mouse hippocampus

    Motti, D., Le Duigou, C., Eugène, E., Chemaly, N., Wittner, L., Lazarevic, D., Krmac, H., Marstrand, T., Valen, E., Sanges, R., Stupka, E., Sandelin, Albin Gustav, Cherubini, E., Gustincich, S. & Miles, R., 2010, In: European Journal of Neuroscience. 32, 8, p. 1364-79 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    TOPBP1 regulates RAD51 phosphorylation and chromatin loading and determines PARP inhibitor sensitivity

    Moudry, P., Watanabe, K., Wolanin, K. M., Bartkova, J., Wassing, I. E., Watanabe, S., Strauss, R., Pedersen, R. T., Østergaard, Vibe Hallundbæk, Lisby, Michael, Andújar-Sánchez, M., Maya-Mendoza, A., Esashi, F., Lukas, Jiri & Bartek, J., 2016, In: The Journal of Cell Biology. 212, 3, p. 281-288 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Major and minor crRNA annealing sites facilitate low stringency DNA protospacer binding prior to Type I-A CRISPR-Cas interference in Sulfolobus

    Mousaei, M., Deng, Ling, She, Q. & Garrett, Roger Antony, 2016, In: R N A Biology. 13, 11, p. 1166-1173 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Autophagy deficiency leads to accumulation of ubiquitinated proteins, ER stress, and cell death in Arabidopsis

    Munch, D., Rodriguez, E., Bressendorff, Simon, Park, O. K., Hofius, D. & Petersen, Morten, 2014, In: Autophagy. 10, 9, p. 1579-1587 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Autophagy and Retromer Components in Plant Innate Immunity

    Munch, D., 2014, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  70. Published

    Retromer contributes to immunity-associated cell death in Arabidopsis

    Munch, D., Teh, O., Malinovsky, F. G., Liu, Q., Vetukuri, R. R., El Kasmi, F., Brodersen, Peter, Hara-Nishimura, I., Dangl, J. L., Petersen, Morten, Mundy, J. & Hofius, D., 2015, In: Plant Cell. 27, 2, p. 463-479 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Comparative Effectiveness of Low-Volume Time-Efficient Resistance Training Versus Endurance Training in Patients With Heart Failure

    Munch, G. W., Rosenmeier, J. B., Petersen, Morten, Rinnov, A. R., Iepsen, U. W., Pedersen, Bente Klarlund & Mortensen, S. P., 2018, In: Journal of Cardiopulmonary Rehabilitation and Prevention. 38, 3, p. 175-181 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Top2 and Sgs1-Top3 act redundantly to ensure rDNA replication termination

    Mundbjerg, K., Jørgensen, S. W., Fredsøe, J. C., Nielsen, I., Pedersen, J. M., Bentsen, I. B., Lisby, Michael, Bjergbaek, L. & Andersen, A. H., 2015, In: P L o S Genetics. 11, 12, 24 p., e1005697.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Large Intronic Deletion of the Fragile Site Gene PRKN Dramatically Lowers Its Fragility Without Impacting Gene Expression

    Munk, S. H. N., Voutsinos, Vasileios & Østergaard, Vibe Hallundbæk, 2021, In: Frontiers in Genetics. 12, 9 p., 695172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Population genetic structure of the common warthog (Phacochoerus africanus) in Uganda: evidence for a strong philopatry among warthogs and social structure breakdown in a disturbed population

    Muwanka, V. B., Nyakaana, S., Siegismund, Hans Redlef & Arctander, P., 2007, In: African Journal of Ecology. 45, 1, p. 22-30

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    RNAi screening for characterisation of ER-associated degradation pathways in mammalian cells

    Månsson, M. D. J., 2013, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  76. Published

    Frequent disruption of the RB1 pathway in diffuse large B cell lymphoma: prognostic significance of E2F-1 and p16INK4A

    Møller, M. B., Kania, Per, Ino, Y., Gerdes, Anne-Marie Axø, Nielsen, Olaf, Louis, D. N., Skjødt, K. & Pedersen, N. T., May 2000, In: Leukemia. 14, 5, p. 898-904 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Regulation of ribonucleotide reductase by Spd1 involves multiple mechanisms

    Nestoras, K., Mohammed, A. H., Schreurs, A., Fleck, O., Watson, A. T., Poitelea, M., O'Shea, Charlotte, Chahwan, C., Holmberg, Christian, Kragelund, Birthe Brandt, Nielsen, Olaf, Osborne, M., Carr, A. M. & Liu, C., 1 Jun 2010, In: Genes & Development. 24, 11, p. 1145-1159 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Establishment of heterochromatin in domain-size-dependent bursts

    Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    The transcription factor Atf1 lowers the transition barrier for nucleosome-mediated establishment of heterochromatin

    Nickels, Jan Fabio, Della-Rosa, M. E., Miguelez Goyeneche, I., Charlton, Sebastian Jespersen, Sneppen, Kim & Thon, Genevieve, 2022, In: Cell Reports. 39, 7, 17 p., 110828.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Endonucleolysis in the turnover of insulin-like growth factor II mRNA

    Nielsen, F. C. & Christiansen, Jan, 1992, In: Journal of Biological Chemistry. 267, 27, p. 19404-11 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Insulin-like growth factor II mRNA, peptides, and receptors in a thoracopulmonary malignant small round cell tumor

    Nielsen, F. C., Orskov, C., Haselbacher, G., Ramlau, J., Christiansen, Jan, Schmiegelow, Kjeld & Rehfeld, Jens Frederik, 1994, In: Cancer. 73, 4, p. 1312-9 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Biosynthesis of 10 kDa and 7.5 kDa insulin-like growth factor II in a human rhabdomyosarcoma cell line

    Nielsen, F. C., Haselbacher, G., Christiansen, Jan, Lake, M., Gammeltoft, S. & Grønborg, M., 1993, In: Molecular and Cellular Endocrinology. 93, 1, p. 87-95 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Aspects of ribonucleotide reductase regulation and genome stability: a study of human ribonucleotide reductase ssing fission yeast as a model

    Nielsen, H. B. N., 2014, Department of Biology, Faculty of Science, University of Copenhagen. 149 p.

    Research output: Book/Report › Ph.D. thesis › Research

  84. Published

    A conformational switch in the DiGIR1 ribozyme involved in release and folding of the downstream I-DirI mRNA

    Nielsen, Henrik, Einvik, C., Lentz, T. E., Hedegaard, M. M. & Johansen, S. D., 2009, In: RNA: A publication of the RNA Society. 15, 5, p. 958-67 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    A Flp-nick system to study repair of a single protein-bound nick in vivo

    Nielsen, I., Bentsen, I. B., Lisby, Michael, Hansen, S., Mundbjerg, K., Andersen, A. H. & Bjergbaek, L., 2009, In: Nature Methods. 6, 10, p. 753-757 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    The fission yeast ubiquitin-conjugating enzymes UbcP3, Ubc15, and Rhp6 affect transcriptional silencing of the mating-type region

    Nielsen, I. S., Nielsen, Olaf, Murray, J. M. & Thon, Genevieve, 1 Aug 2002, In: Eukaryotic Cell (Online Edition). 1, 4, p. 613-25 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Genetic diversity and phylogenetic analysis of the attachment glycoprotein of phocine distemper viruses of the 2002 and 1988 epizootics

    Nielsen, L., Arctander, P., Jensen, T. H., Dietz, Hans Henrik, Hammer, A. S., Banyard, A., Barrett, T. & Blixenkrone-Møller, M., 2009, In: Virus Research. 144, 1-2, p. 323-328 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Inhibition of constitutively activated Stat3 correlates with altered Bcl-2/Bax expression and induction of apoptosis in mycosis fungoides tumor cells

    Nielsen, M., Kaestel, C. G., Eriksen, K. W., Woetmann, Anders , Stokkedal, T., Kaltoft, K., Geisler, Carsten, Röpke, C. & Odum, N., 1999, In: Leukemia. 13, 5, p. 735-8 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    The pat1 protein kinase controls transcription of the mating-type genes in fission yeast

    Nielsen, O., Egel, Richard & Nielsen, Olaf, 1 May 1990, In: E M B O Journal. 9, 5, p. 1401-6 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Pheromone communication in the fission yeast Schizosaccharomyces pombe

    Nielsen, O., Davey, W. J. & Nielsen, Olaf, 1 Apr 1995, In: Seminars in Cell Biology. 6, 2, p. 95-104 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    The ras1 function of Schizosaccharomyces pombe mediates pheromone-induced transcription

    Nielsen, O., Davey, W. J., Egel, Richard & Nielsen, Olaf, 1 Apr 1992, In: E M B O Journal. 11, 4, p. 1391-5 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Mapping the double-strand breaks at the mating-type locus in fission yeast by genomic sequencing

    Nielsen, O., Egel, Richard & Nielsen, Olaf, 1 Jan 1989, In: E M B O Journal. 8, 1, p. 269-76 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    The Schizosaccharomyces pombe map1 gene encodes an SRF/MCM1-related protein required for P-cell specific gene expression

    Nielsen, O., Friis, T., Kjaerulff, S. & Nielsen, Olaf, 13 Dec 1996, In: Molecular and General Genetics MGG. 253, 3, p. 387-92 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Signal transduction during mating and meiosis in S. pombe

    Nielsen, O. & Nielsen, Olaf, 1 Feb 1993, In: Trends in Cell Biology. 3, 2, p. 60-5 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Once in a lifetime: strategies for preventing re-replication in prokaryotic and eukaryotic cells.

    Nielsen, Olaf & Løbner-Olesen, Anders, 2008, In: EMBO Reports. 9, 2, p. 151-156 5 p.

    Research output: Contribution to journal › Review › Research › peer-review

  96. Published

    Synchronization of S phase in Schizosaccharomyces pombe cells by transient exposure to M-factor pheromone

    Nielsen, Olaf, 2016, In: Cold Spring Harbor Protocols. 2016, 9, p. 768-772 5 p.

    Research output: Contribution to journal › Journal article › Research

  97. Published

    Fission yeast goes synthetic.

    Nielsen, Olaf, 2007, In: Nature Methods. 4, 10, p. 777-8 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    COP9 signalosome: a provider of DNA building blocks

    Nielsen, Olaf, 15 Jul 2003, In: Current Biology. 13, 14, p. R565-7

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Serine-Threonine Kinases Encoded by Split hipA Homologs Inhibit Tryptophanyl-tRNA Synthetase

    Nielsen, S. V., Turnbull, K. J., Roghanian, Mohammad, Bærentsen, R., Semanjski, M., Brodersen, D. E., Macek, B. & Gerdes, K., 2019, In: mBio. 10, 3, 16 p., e-01138-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux

    Norman, A., Hansen, Lars Hestbjerg, She, Q. & Sørensen, Søren Johannes, 2008, In: Plasmid. 60, 1, p. 59-74 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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