- 2017
- Published
Matching NLR immune receptors to autoimmunity in camta3 mutants using antimorphic NLR alleles
Lolle, S., Greeff, M. C., Petersen, K., Roux, M. E., Jensen, M. K., Bressendorff, Simon, Rodriguez, Eleazar, Sømark, K., Mundy, J. & Petersen, Morten, 2017, In: Cell Host & Microbe. 21, 4, p. 518-529 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uncovering the roots of paranoid suicidal plants
Lolle, S., 2017, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Formation of a viral replication focus in Sulfolobus cells infected by the rudivirus Sulfolobus islandicus rod-shaped virus 2
Martinez Alvarez, Laura, Deng, Ling & Peng, Xu, Jul 2017, In: Journal of Virology. 91, 13, 12 p., e00486-17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea
Peng, N., Han, W., Li, Y., Liang, Y. & She, Q., 30 Apr 2017, In: Science China Life Sciences. 60, 4, p. 370-385 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Peptide-nucleotide antibiotic Microcin C is a potent inducer of stringent response and persistence in both sensitive and producing cells
Piskunova, J., Maisonneuve, E., Germain-Maisonneuve, E., Gerdes, K. & Severinov, K., May 2017, In: Molecular Microbiology. 104, 3, p. 463-471 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
UBL/BAG-domain co-chaperones cause cellular stress upon overexpression through constitutive activation of Hsf1
Poulsen, E. G., Kampmeyer, Caroline, Kriegenburg, F., Johansen, Jens Vilstrup, Hofmann, K., Holmberg, Christian & Hartmann-Petersen, Rasmus, Jan 2017, In: Cell Stress & Chaperones. 22, 1, p. 143-154 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-scale genetic interactions and cell imaging confirm cytokinesis as deleterious to transient topoisomerase II deficiency in Saccharomyces cerevisiae
Ramos-Pérez, C., Ayra-Plasencia, J., Matos-Perdomo, E., Lisby, Michael, Brown, G. W. & Machín, F., Oct 2017, In: G3: Genes, Genomes, Genetics (Bethesda). 7, 10, p. 3379-3391 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Autophagy is required for gamete differentiation in the moss Physcomitrella patens
Sanchez-Vera, V., Kenchappa, C. S., Landberg, K., Bressendorff, Simon, Schwarzbach, S., Martin, T., Mundy, J., Petersen, Morten, Thelander, M. & Sundberg, E., 2017, In: Autophagy. 13, 11, p. 1939-1951 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High intracellular c-di-GMP levels antagonize quorum sensing and virulence gene expression in Burkholderia cenocepacia H111
Schmid, N., Suppiger, A., Steiner, E., Pessi, G., Kaever, V., Fazli, M., Tolker-Nielsen, Tim, Jenal, U. & Eberl, L., 1 May 2017, In: Microbiology. 163, 5, p. 754-764 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Esc2 promotes Mus81 complex-activity via its SUMO-like and DNA binding domains
Sebesta, M., Urulangodi, M., Stefanovie, B., Szakal, B., Pacesa, M., Lisby, Michael, Branzei, D. & Krejci, L., Jan 2017, In: Nucleic Acids Research. 45, 1, p. 215-230 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Determination of protein turnover in E. coli cells during exit from persistence
Semanjski, M., Germain-Maisonneuve, E., Gerdes, K. & Macek, B., 2017, In: F A S E B Journal. 31, S1, 1 p., 915.2.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Archaea and CRISPR biology
She, Q. & Han, W., 17 Aug 2017, In: Microbiology Today. 44, 3, p. 122-125 4 p.Research output: Contribution to journal › Journal article › Communication
- Published
DNA damage repair in Archaea
She, Q., Feng, X. & Han, W., 2017, Biocommunication of Archaea. Witzany, G. (ed.). Springer, p. 305-318 14 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages
Sinha, V., Goyal, A., Svenningsen, Sine Lo, Semsey, S. & Krishna, S., 26 Jul 2017, In: Frontiers in Microbiology. 8, 11 p., 1386.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Elucidating the roles of MAP kinases in the moss Physcomitrella patens
Stanimirovic, S., 2017, Department of Biology, Faculty of Science, University of Copenhagen. 230 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The extraordinary thermal stability of EstA from S. islandicus is independent of post translational modifications
Stiefler-Jensen, D., Schwarz-Linnet, T., de Lichtenberg, C., Nguyen, T. T. T. N., Rand, Kasper Dyrberg, Huang, L., She, Q. & Teilum, Kaare, Sep 2017, In: Protein Science. 26, 9, p. 1819-1827 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel method for quantitative estimation of biofilms
Syal, K., Oct 2017, In: Current Microbiology. 74, 10, p. 1194-1199 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronized switching of multiple toxin-antitoxin modules by (p)ppGpp fluctuation
Tian, C., Semsey, S. & Mitarai, Namiko, 21 Aug 2017, In: Nucleic Acids Research. 45, 14, p. 8180-8189 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Establishment of expression-state boundaries by Rif1 and Taz1 in fission yeast
Toteva, T., Mason, B., Kanoh, Y., Brøgger, P., Green, D., Hansen, J. V., Masai, H. & Thon, Genevieve, 31 Jan 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 5, p. 1093-1098 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
HicA toxin of Escherichia coli derepresses hicAB transcription to selectively produce HicB antitoxin
Turnbull, K. & Gerdes, K., Jun 2017, In: Molecular Microbiology. 104, 5, p. 781-792 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SMV1, an extremely stable thermophilic virus platform for nanoparticle trafficking in the mammalian GI tract
Uldahl, K. B., Walk, S. T., Olshefsky, S. C., Young, M. J. & Peng, Xu, Nov 2017, In: Journal of Applied Microbiology. 123, 5, p. 1286-1297 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
In vivo and in vitro protein imaging in thermophilic archaea by exploiting a novel protein tag
Visone, V., Han, W., Perugino, G., del Monaco, G., She, Q., Rossi, M., Valenti, A. & Ciaramella, M., 3 Oct 2017, In: PLoS ONE. 12, 10, 19 p., e0185791.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Global, regional, and national under-5 mortality, adult mortality, age-specific mortality, and life expectancy, 1970-2016: A systematic analysis for the Global Burden of Disease Study 2016
Wang, H., Abajobir, A. A., Abate, K. H., Abbafati, C., Abbas, K. M., Abd-Allah, F., Abera, S. F., Abraha, H. N., Abu-Raddad, L. J., Abu-Rmeileh, N. M. E., Adedeji, I. A., Adedoyin, R. A., Adetifa, I. M. O., Adetokunboh, O., Afshin, A., Aggarwal, R., Agrawal, A., Agrawal, S., Ahmad Kiadaliri, A., Ahmed, M. B. & 31 others, , 2017, In: The Lancet. 390, 10100, p. 1084-1150 67 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of RNA metabolism in fission yeast
Wise, J. A. & Nielsen, Olaf, May 2017, In: Cold Spring Harbor Protocols. 2017, 5, p. 365-372 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interaction of extremophilic archaeal viruses with human and mouse complement system and viral biodistribution in mice
Wu, L., Uldahl, K. B., Chen, F., Benasutti, H., Logvinski, D., Vu, V., Banda, N. K., Peng, Xu, Simberg, D. & Moghimi, S. M., Oct 2017, In: Molecular Immunology. 90, p. 273-279 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phosphatidylserine stimulates ceramide 1-phosphate (C1P) intermembrane transfer by C1P transfer proteins
Zhai, X., Gao, Y., Mishra, S. K., Simanshu, D. K., Boldyrev, I. A., Benson, L. M., Bergen III, H. R., Malinina, L., Mundy, J., Molotkovsky, J. G., Patel, D. J. & Brown, R. E., 10 Feb 2017, In: Journal of Biological Chemistry. 292, 6, p. 2531-2541 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic and transcriptomic analyses reveal distinct biological functions for cold shock proteins (VpaCspA and VpaCspD) in Vibrio parahaemolyticus CHN25 during low-temperature survival
Zhu, C., Sun, B., Liu, T., Zheng, H., Gu, W., He, W., Sun, F., Wang, Y., Yang, M., Bei, W., Peng, Xu, She, Q., Xie, L. & Chen, L., 5 Jun 2017, In: BMC Genomics. 18, 19 p., 436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ciprofloxacin intercalated in fluorohectorite clay: identical pure drug activity and toxicity with higher adsorption and controlled release rate
dos Santos, E. C., Rozynek, Z., Hansen, E. L., Hartmann-Petersen, Rasmus, Klitgaard, R. N., Løbner-Olesen, Anders, Michels, L., Mikkelsen, A., Plivelic, Nunes Bordallo, Heloisa & Fossum, J. O., 17 May 2017, In: R S C Advances. 7, 43, p. 26537-26545Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcription-replication conflicts at chromosomal fragile sites—consequences in M phase and beyond
Østergaard, Vibe Hallundbæk & Lisby, Michael, Mar 2017, In: Chromosoma. 126, 2, p. 213-222 10 p.Research output: Contribution to journal › Review › Research › peer-review
- 2016
- Published
The transcriptional regulator GalR self-assembles to form highly regular tubular structures
Agerschou, E. D., Christiansen, G., Schafer, N. P., Madsen, D. J., Brodersen, D. E., Semsey, S. & Otzen, D. E., 2016, In: Scientific Reports. 6, 13 p., 27672 .Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterizing leader sequences of CRISPR loci
Alkhnbashi, O., Shah, S. A., Garrett, Roger Antony, Saunders, S. J., Costa, F. & Backofen, R., 2016, In: Bioinformatics. 32, 17, p. i576-i585 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Protein Kinase Signalling in the Moss Physcomitrella patens
Azevedo de Silva, R., 2016, Department of Biology, Faculty of Science, University of Copenhagen. 109 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
An innate immunity pathway in the moss Physcomitrella patens
Bressendorff, Simon, Azevedo da Silva, R., Kenchappa, C. S., Ponce de León, I., Olsen, J. V., Rasmussen, M. W., Erbs, G., Newman, Mari-Anne, Petersen, Morten & Mundy, J., 2016, In: The Plant Cell. 28, 6, p. 1328-1342 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isolation of a novel protein, P12-from adult Drosophila melanogaster that inhibits deoxyribonucleoside and protein kinase activities and activates 3'-5'-exonuclease activity
Christiansen, L. S., Zanten, G. V., Berenstein, D., Lauridsen, M., Kjærulff, S., Søndergaard, Leif & Munch-Petersen, B., 2016, In: Nucleosides, Nucleotides and Nucleic Acids. 35, 10-12, p. 699-706 8 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Barley plants over-expressing the NAC transcription factor gene HvNAC005 show stunting and delay in development combined with early senescence
Christiansen, M. W., Matthewman, C., Podzimska-Sroka, D. A., O'Shea, Charlotte, Lindemose, Søren, Møllegaard, Niels Erik, Holme, I. B., Hebelstrup, K., Skriver, Karen & Gregersen, P. L., 2016, In: Journal of Experimental Botany. 67, 17, p. 5259-5273 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SUMO-dependent relocalization of eroded telomeres to nuclear pore complexes controls telomere recombination
Churikov, D., Charifi, F., Eckert-Boulet, N. V., Pinela da Silva, S. C., Simon, M., Lisby, Michael & Géli, V., 2016, In: Cell Reports. 15, 6, p. 1242-1253 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA replication control is linked to genomic positioning of control regions in Escherichia coli
Frimodt-Møller, Jakob, Charbon, Godefroid, Krogfelt, K. A. & Løbner-Olesen, Anders, 2016, In: P L o S Genetics. 12, 9, 27 p., e1006286.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TopBP1-mediated DNA processing during mitosis
Gallina, I., Christiansen, S. K., Pedersen, R. T., Lisby, Michael & Østergaard, Vibe Hallundbæk, 2016, In: Cell Cycle. 15, 2, p. 176-183 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Archaeal physiology: the secrets of termination
Garrett, Roger Antony, 2016, In: Nature Microbiology. 1, 2 p., 16159.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isolation and characterization of the first Xylanolytic hyperthermophilic euryarchaeon Thermococcus sp strain 2319x1 and its unusual multidomain glycosidase
Gavrilov, S. N., Stracke, C., Jensen, K., Menzel, P., Kallnik, V., Slesarev, A., Sokolova, T., Zayulina, K., Bräsen, C., Bonch-Osmolovskaya, E. A., Peng, Xu, Kublanov, I. V. & Siebers, B., 2016, In: Frontiers in Microbiology. 7, 17 p., 552.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hypothesis: type I toxin - antitoxin genes enter the persistence field-a feedback mechanism explaining membrane homoeostasis
Gerdes, K., 2016, In: Royal Society of London. Philosophical Transactions B. Biological Sciences. 371, 1707, 9 p., 20160189.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbiology: pumping persisters
Gerdes, K. & Semsey, S., 2016, In: Nature. 534, 7605, p. 41-42 2 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species
Guannan, L., She, Q. & Garrett, Roger Antony, 2016, In: Nucleic Acids Research. 44, 9, p. 4233-4242 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Back to the roots: deep view into the evolutionary history of ADP-ribosylation opened by the DNA-targeting toxin-antitoxin module DarTG
Harms, A. & Gerdes, K., 15 Dec 2016, In: Molecular Cell. 64, 6, p. 1020-1021 2 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Mechanisms of bacterial persistence during stress and antibiotic exposure
Harms, A., Maisonneuve, E. & Gerdes, K., 2016, In: Science. 354, 6318, 10 p., aaf4268.Research output: Contribution to journal › Review › Research › peer-review
- Published
"Population structure of drug-susceptible, -resistant and ESBL-producing Escherichia coli from community-acquired urinary tract infections"
Hertz, F. B., Nielsen, J. B., Schønning, Kristian, Littauer, P., Knudsen, J. D., Løbner-Olesen, Anders & Frimodt-Møller, N., 11 Apr 2016, In: BMC Microbiology. 16, 6 p., 63.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epidemiological factors associated with ESBL- and non ESBL-producing E. coli causing urinary tract infection in general practice
Hertz, F. B., Schønning, K., Rasmussen, S. C., Littauer, P., Knudsen, J. D., Løbner-Olesen, Anders & Frimodt-Møller, N., 2016, In: Infectious Diseases. 48, 3, p. 241-245 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Configuration-dependent Presentation of Multivalent IL-15: IL-15Rα enhances the antigen-specific T cell response and anti-tumor immunity
Hong, E., Usiskin, I. M., Bergamaschi, C., Hanlon, D. J., Edelson, R. L., Justesen, S., Pavlakis, G. N., Flavell, R. A. & Fahmy, T. M., 22 Apr 2016, In: Journal of Biological Chemistry. 291, 17, p. 8931-8950 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mining Hot Springs for Biodiversity and Novel Enzymes
Islin, S. R., 2016, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs
Islin, S. R., Menzel, P., Krogh, Anders, Young, M. & Peng, Xu, 2016, In: Environmental Microbiology. 18, 3, p. 863-874 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Receptor-like kinase complexes in plant innate immunity
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MAP kinase cascades in Arabidopsis innate immunity
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relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data
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