Mathias Middelboe

Mathias Middelboe

Professor

ORCID: 0000-0002-9587-9171

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  1. Published

    Tracing the long-term microbial production of recalcitrant fluorescent dissolved organic matter in seawater

    Jørgensen, L., Stedmon, C. A., Granskog, M. A. & Middelboe, Mathias, 2014, In: Geophysical Research Letters. 41, 7, p. 2481-2488 8 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  2. Published

    Production and transformation of dissolved neutral sugars and amino acids by bacteria in seawater

    Jørgensen, L., Lechtenfeld, O. J., Benner, R., Middelboe, Mathias & Stedmon, C. A., 2014, In: Biogeosciences. 11, p. 5349-5363 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Changes in the composition and bioavailability of dissolved organic matter during sea ice formation

    Jørgensen, L., Stedmon, C. A., Kaartokallio, H., Middelboe, Mathias & Thomas, D. N., 2015, In: Limnology and Oceanography. 60, 3, p. 817-830 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Occurrence and bacterial cycling of D amino acid isomers in an estuarine environment

    Jørgensen, Niels O. G. & Middelboe, Mathias, 2006, In: Biogeochemistry. 81, 1, p. 77-94 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Bacteriophage Interactions with Marine Pathogenic Vibrios: Implications for Phage Therapy

    Kalatzis, Panagiotis, Castillo Bermúdez, D. E., Katharios, P. & Middelboe, Mathias, 2018, In: Antibiotics. 7, 1, 23 p., 15.

    Research output: Contribution to journal › Review › Research › peer-review

  6. Published

    Stumbling across the same phage: comparative genomics of widespread temperate phages infecting the fish pathogen Vibrio anguillarum

    Kalatzis, Panagiotis, Rørbo, N. I., Castillo Bermúdez, D. E., Mauritzen, Jesper Juel, Jørgensen, J., Kokkari, C., Zhang, F., Katharios, P. & Middelboe, Mathias, 20 May 2017, In: Viruses. 9, 5, 19 p., 122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Staying below the Radar: Unraveling a New Family of Ubiquitous “Cryptic” Non-Tailed Temperate Vibriophages and Implications for Their Bacterial Hosts

    Kalatzis, P. G., Mauritzen, Jesper Juel, Winther-Have, Caroline Sophie W, Michniewski, S., Millard, A., Tsertou, M. I., Katharios, P. & Middelboe, Mathias, 2023, In: International Journal of Molecular Sciences. 24, 4, 23 p., 3937.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Complete Genome Sequence of Vibrio anguillarum Nontailed Bacteriophage NO16

    Kalatzis, Panagiotis, Carstens, A. B., Katharios, P., Castillo, D., Hansen, L. H. & Middelboe, Mathias, 2019, In: Microbiology resource announcements. 8, 15, p. 1-2 e00020-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Isolation and characterization of a N4-like lytic bacteriophage infecting Vibrio splendidus, a pathogen of fish and bivalves

    Katharios, P., Kalatzis, Panagiotis, Kokkari, C., Sarropoulou, E. & Middelboe, Mathias, 28 Dec 2017, In: PLoS ONE. 12, 12, 14 p., e0190083.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Comparison of Delivery Methods in Phage Therapy against Flavobacterium columnare Infections in Rainbow Trout

    Kunttu, H. M. T., Runtuvuori-Salmela, A., Middelboe, Mathias, Clark, J. & Sundberg, L. R., 2021, In: Antibiotics. 10, 8, 19 p., 914.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Bacteriophage Resistance Affects Flavobacterium columnare Virulence Partly via Mutations in Genes Related to Gliding Motility and the Type IX Secretion System

    Kunttu, H. M. T., Runtuvuori-Salmela, A., Sundell, K., Wiklund, T., Middelboe, Mathias, Landor, L., Ashrafi, R., Hoikkala, V. & Sundberg, L., 2021, In: Applied and Environmental Microbiology. 87, 16, 19 p., e00812-21 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Predation and selection for antibiotic resistance in natural environments

    Leisner, Jørgen, Jørgensen, Niels O. G. & Middelboe, Mathias, 2016, In: Evolutionary Applications (Online). 9, 3, p. 427-434 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Interactions between the Prophage 919TP and Its Vibrio cholerae Host: Implications of gmd Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility

    Li, N., Zeng, Y., Hu, B., Zhu, T., Svenningsen, Sine Lo, Middelboe, Mathias & Tan, D., 2021, In: Viruses. 13, 12, 15 p., 2342.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Viral lysis of Micromonas pusilla: impacts on dissolved organic matter production and composition

    Lonborg, C., Middelboe, Mathias & Brussaard, C. P. D., 2013, In: Biogeochemistry. 116, 1-3, p. 231-240 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Dispersal and survival of Flavobacterium psychrophilum phages In Vivo in rainbow trout and In Vitro under laboratory conditions: implications for their use in phage therapy

    Madsen, L., Bertelsen, S. K., Dalsgaard, I. & Middelboe, Mathias, 2013, In: Applied and Environmental Microbiology. 79, 16, p. 4853-4861 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change

    Markussen, T. M., Happel, E. M., Teikari, J. E., Huchaiah, V., Alneberg, J., Andersson, A. F., Sivonen, K., Riemann, Lasse, Middelboe, Mathias & Kisand, V., 2018, In: Environmental Microbiology. 20, 8, p. 3083-3099

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Antagonistic coevolution of marine planktonic viruses and their hosts

    Martiny, J. B. H., Riemann, Lasse, Marston, M. F. & Middelboe, Mathias, 2014, In: Annual Review of Marine Science. 6, p. 393-414 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum

    Mauritzen, Jesper Juel, Søndberg, E., Kalatzis, Panagiotis, Roager, L., Gram, L., Svenningsen, Sine Lo & Middelboe, Mathias, 2023, In: Environmental Microbiology. 25, 7, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Beyond Cholera: Characterization of zot-Encoding Filamentous Phages in the Marine Fish Pathogen Vibrio anguillarum

    Mauritzen, Jesper Juel, Castillo, D., Tan, D., Svenningsen, Sine Lo & Middelboe, Mathias, 2020, In: Viruses. 12, 7, 17 p., 730.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Distribution of viruses and bacteria in relation to diagenetic activity in an estuarine sediment

    Middelboe, Mathias, Glud, R. N. & Finster, K., 2003, In: Limnology and Oceanography. 48(4), p. 1447-1456

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Concentration and bacterial utilization of sub-micron particles and dissolved organic carbon in lakes and a coastal area

    Middelboe, Mathias & Sondergaard, M., 1 Jan 1995, In: Archiv fur Hydrobiologie. 133, 2, p. 129-147 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Microbial activity in the Greenland Sea: role of DOC lability, mineral nutrients and temperature.

    Middelboe, Mathias & Lundsgaard, C., 2003, In: Aquatic Microbial Ecology. 32, p. 151-163

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Spatial distribution and activity of viruses in the deep-sea sediments of Sagami Bay, Japan

    Middelboe, Mathias, Glud, R. N., Wenzhöfer, F., Oguri, K. & Kitazato, H., 2006, In: Deep-Sea Res. I. 53, p. 1-13

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Attached and free-living bacteria: Production and polymer hydrolysis during a diatom bloom

    Middelboe, Mathias, Søndergaard, M., Letarte, Y. & Borch, N. H., 1 May 1995, In: Microbial Ecology. 29, 3, p. 231-248 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Bacterial utilization of dissolved organic carbon (DOC) in coastal waters - determination of growth yield.

    Middelboe, Mathias, Nielsen, B. & Søndergaard, M., 1992, In: Arch. Hydrobiol. Beih.. 37, p. 51-61

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Bacterial carbon cycling in a subarctic fjord: a seasonal study on microbial activity, growth efficiency, and virus-induced mortality in Kobbefjord, Greenland

    Middelboe, Mathias, Glud, R. N. & Sejr, M. K., 2012, In: Limnology and Oceanography. 57, 6, p. 1732-1742 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Influence of sediment on pelagic carbon and nitrogen turnover in a shallow Danish estuary

    Middelboe, Mathias, Kroer, Niels, Jørgensen, N. O. G. & Pakulski, D., 1998, In: Microbial Ecology. 14, p. 81-90

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Effects of Bacteriophages on the Population Dynamics of Four Strains of Pelagic Marine Bacteria

    Middelboe, Mathias, Hagström, Å., Blackburn, N., Sinn, B., Fischer, U., Borch, N. H., Pinhassi, J., Simu, K. & Lorenz, M. G., 2001, In: Microbial Ecology. 42, p. 395-406

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Regeneration of dissolved organic matter by viral lysis in marine microbial communities

    Middelboe, Mathias & Lyck, P. G., 2002, In: Aquatic Microbial Ecology. 27, p. 187-194

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Viral and bacterial production in the North Water: in situ measurements, batch-culture experiments and characterization and distribution of a virus-host system

    Middelboe, Mathias, Nielsen, T. G. & Bjørnsen, P. K., 2002, In: Deep Sea Research - Part II - Topical Studies in Oceanography. 49, p. 5063-5079

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Viral activity along a trophic gradient in continental margin sediments off central Chile

    Middelboe, Mathias & Glud, R. N., Mar 2006, In: Marine Biology Research. 2, 1, p. 41-51 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Viral lysis of bacteria: an important source of dissolved amino acids and cell wall compounds

    Middelboe, Mathias & Jørgensen, Niels O. G., 2006, In: Journal of the Marine Biological Association of the United Kingdom. 86, 3, p. 605-612 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Bacterial utilization of dissolved free amino acids, dissolved combined amino acids and ammonium in the Delaware Bay estuary: effects of carbon and nitrogen limitation

    Middelboe, Mathias, Borch, N. H. & Kirchman, D. L., 1995, In: Marine Ecology - Progress Series. 128, p. 109-120 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Nye studier af bakterieplanktonets økologi

    Middelboe, Mathias, Nielsen, B. & Søndergaard, M., 1992, In: Vand og miljø. 4, p. 115-118

    Research output: Contribution to journal › Journal article › Research

  35. Published

    Effects of viruses on nutrient turnover and growth efficiency of noninfected marine bacterioplankton

    Middelboe, Mathias, Jørgensen, Niels O. G. & Kroer, Niels, 1996, In: Applied and Environmental Microbiology. 62, 6, p. 1991-1997 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Isolation and life cycle characterization of lytic viruses infecting heterotrophic bacteria and cyanobacteria

    Middelboe, Mathias, Chan, A. & Bertelsen, S. K., 2010, Manual of aquatic viral ecology. Wilhelm, S. W., Weinbauer, M. G. & Suttle, C. A. (eds.). Waco, Tex: American Society of Limnology and Oceanography, Inc., p. 118-33 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  37. Published

    Microbial disease in the sea: Effects of viruses on carbon and nutrient cycling

    Middelboe, Mathias, 16 Dec 2010, Infectious Disease Ecology: Effects of Ecosystems on Disease and of Disease on Ecosystems. Princeton University Press, p. 242-259 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  38. Published

    Virus-induced transfer of organic carbon between marine bacteria in a model community.

    Middelboe, Mathias, Riemann, Lasse, Steward, G. F., Hansen, V. & Nybroe, O., 2003, In: Aquatic Microbial Ecology. 33, 1, p. 1-10 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Attached and freeliving bacteria: Production and polymer hydrolysis during a diatom bloom

    Middelboe, Mathias, Søndergaard, M., Letarte, Y. & Borch, N. H., 1995, In: Microbial Ecology. 29, p. 231-248

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Virus - de mindste biologiske strukturer i havet.

    Middelboe, Mathias, 2003, In: Carlsbergfondets Årsskrift. IV, p. 28-35

    Research output: Contribution to journal › Journal article › Research

  41. Published

    Virus - havbundens mindste beboere

    Middelboe, Mathias & Glud, R. N., 2006, In: Naturens Verden. 4, p. 32-40

    Research output: Contribution to journal › Journal article › Research

  42. Published

    Viral abundance and activity in the deep sub-seafloor biosphere

    Middelboe, Mathias, Glud, R. N. & Filippini, M., 2011, In: Aquatic Microbial Ecology. 63, 1, p. 1-8

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Viruses in freshwater ecosystems: An introduction to the exploration of viruses in new aquatic habitats

    Middelboe, Mathias, Jacquet, S. & Weinbauer, M., 2008, In: Freshwater Biology. 53, 6, p. 1069-1075

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Concentration and bacterial utilization of submicron particles and dissolved organic carbon in lakes and a coastal area

    Middelboe, Mathias & Søndergaard, M., 1995, In: Polskie Archiwum Hydrobiologii. 133 (2), p. 129-147

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Marine viruses: key players in marine ecosystems

    Middelboe, Mathias & Brussaard, C. P. D., Oct 2017, In: Viruses. 9, 10, 6 p., 302.

    Research output: Contribution to journal › Editorial › Research

  46. Published

    Bacterioplankton growth yield: Seasonal variations and coupling to substrate lability and *GB*-glucosidase activity

    Middelboe, Mathias & Søndergaard, M., 1993, In: Applied and Environmental Microbiology. 59, p. 3916-3921

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Bacterial Growth Rate and Marine Virus-Host Dynamics

    Middelboe, Mathias, 2000, In: Microbial Ecology. 40, p. 114-124

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Bacteriophages drive strain diversification in a marine Flavobacterium: implications for phage resistance and physiological properties

    Middelboe, Mathias, Holmfeldt, K., Riemann, Lasse, Nybroe, O. & Haaber, J. B. B., 2009, In: Environmental Microbiology. 11, 8, p. 1971-1982 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Microbial Disease in the Sea: Effects of Viruses on Marine Carbon and Nutrient Cycling

    Middelboe, Mathias, 2008, Infections Disease Ecology. Princeton University Press, p. 242-260

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  50. Published

    Proteinase production in Pseudomonas fluorescens ON2 is affected by carbon sources and allows surface-attached but not planktonic cells to utilize protein for growth in lake water

    Nicolaisen, Mette Haubjerg, Worm, J., Jørgensen, Niels O. G., Middelboe, Mathias & Nybroe, O., 2012, In: F E M S Microbiology Ecology. 80, 1, p. 168-178 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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